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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6wb91_

Fold library idPDB HeaderMoleculeTitle
c6wb91_3.00PDB header: membrane proteinChain: 1: PDB Molecule: er membrane protein complex subunit 1;


Added to library: Sat Jun 6 08:31:54 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VFSDDAFITDWQLANLGPWEKVIPDSRDRNRVLILSNPTETSCLVSSFNVSSGQILFRNVLPFTIDEIQL
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Known secondary structure (DSSP)

TTTTTTS




S
TTTSS


SS
TTT

SS
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DSNDHNAMVCVNSSSNHWQKYDLHDWFLLEEGVDNAPSTTILQGFNKVEYFHREDPLALVLNVNDTQYMG
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Known secondary structure (DSSP) SS
TTTTTTSSS

SS







TT




SSS

SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence FSANGTELIPVWQRDEWLTNVVDYAVLDVSLWNAYWLRLTTNWNRLINLLKENQTTVSDLKFGFAKILIV
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Known secondary structure (DSSP)
TTSS
TT
SS

B







STT



 .........220.........230.........240.........250.........260.........270.........280
Sequence LTHDGFIGGLDMVNKGQLIWKLDLEIDQGVKMFWTDKNHDELVVFSHDGHYLTIEVTKDQPIIKSRSPLS
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Known secondary structure (DSSP) B
TTS

TTTTS
B





SSSSTT

TTSB

SS



B
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ERKTVDSVIRLNEHDHQYLIKFEDKDHLLFKLNSHIFVTEHDTNGIYGYIIENDTVKQTWKKAVNSKEKM
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Known secondary structure (DSSP) S
S



TTS
TTS





SS
SSS




TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VAYSKRETTNLNTLGITLGDKSVLYKYLYPNLAAYLIANEEHHTITFNLIDTITGEILITQEHKDSPDFR
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Known secondary structure (DSSP)







S
TTS
B


SS
TTTT
SSS


S
B
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence FPMDIVFGEYWVVYSYFSSEPVPEQKLVVVELYESLTPDERLSNSSDNFSYDPLTGHINKPQFQTKQFIF
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Known secondary structure (DSSP) S


SSB
SS
SSS
SSTT


S


TT



TTTT
S


 .........500.........510.........520.........530.........540.........550.........560
Sequence PEIIKTMSISKTTDDITTKAIVMELENGQITYIPKLLLNARGKPAEEMAKDKKKEFMATPYTPVIPINDN
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Known secondary structure (DSSP) SS



SSS
S

TTS
TTTS
TT


S

S
TT




SS



TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence FIITHFRNLLPGSDSQLISIPTNLESTSIICDLGLDVFCTRITPSGQFDLMSPTFEKGKLLITIFVLLVI
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Known secondary structure (DSSP) S
SSTT





SS

SSTT
SSS
TT


SS

TT

 .........640.........
Sequence TYFIRPSVSNKKLKSQWLI
Predicted secondary structure


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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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