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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6w8rB_

Fold library idPDB HeaderMoleculeTitle
c6w8rB_2.80PDB header: plant protein, hydrolaseChain: B: PDB Molecule: metacaspase-4;


Added to library: Sat May 23 08:23:07 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TKKAVLIGINYPGTKAELRGCVNDVRRMYKCLVERYGFSEENITVLIDTDESSTQPTGKNIRRALADLVE
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Known secondary structure (DSSP)



TTSTT

SSTT


GGGSS
TTSB


 .........80.........90.........100.........110.........120.........130.........140
Sequence SADSGDVLVVHYSGHGTRLPAETGEDDDTGFDECIVPCDMNLITDDDFRDLVDKVPPGCRMTIISDSAHS
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Known secondary structure (DSSP) T

TT
S

S

SS



TT


TTS
TT
SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence GGLIDEAKEQAKDKSLPLQTLIDILKQQTGNDNIEVGKIRPSLFDAFGDDSSPKVKKFMKVILGKLQAGN
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Known secondary structure (DSSP) TTSS
S




SB

SS




TTSSSTTS
TSST
 .........220.........230.........240.........250.........260.........270.........280
Sequence GEEGGLMGMLGKLASGFLEGKLNDEDYVKPAMQTHVGSKEEVYAGGSRGSVPLPDSGILISGCQTDQTSA
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Known secondary structure (DSSP) TSTT
TS


SGGGGSSS
SGGGS


TTSS
TTS

 .........290.........300.........310.........320.........330.........340.........350
Sequence DATPAGKPTEAYGAMSNSIQTILEETDGEISNREMVTRARKALKKQGFTQQPGLYCHDGYANAPFICVDK
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Known secondary structure (DSSP)

SS
GGG

SS

BTT





STTSTTSBSSS


 ..
Sequence LA
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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