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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6w6jD_

Fold library idPDB HeaderMoleculeTitle
c6w6jD_3.20PDB header: chaperoneChain: D: PDB Molecule: chaperone protein clpb;


Added to library: Sat May 29 09:01:42 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FNPTTKTQAALTAALQAASTAGNPEIRPAHLLMALLTQNDGIAAPLLEAVGVEPATVRAETQRLLDRLPQ
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Known secondary structure (DSSP)



TTT
S
T
TT
SSTT

SSSTTTTTGGGTTTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence QPQLSRESLAAITTAQQLATELDDEYVSTEHVMVGLATGDSDVAKLLTGHGASPQALREAFVKVRGTSPE
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Known secondary structure (DSSP)


TTTTT
SS





TSTT



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PEATYQALQKYSTDLTARAREGKLDPVIGRDNEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRI
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Known secondary structure (DSSP) S


SSSTT
S





T
SS


STTSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VAGDVPESLRDKTIVALDLGSMVAGSKYRGEFEERLKAVLDDIKNSAGQIITFIDELHTIVGAGADAGNM
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Known secondary structure (DSSP) TT
S
GGGSS



STTTSSS

STTSTS
S


SGGGGS





S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence IKPMLARGELRLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRGLKDRYEVHHGVRITDS
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Known secondary structure (DSSP) STTTSS

TGGG
TT





SS

 .........360.........370.........380.........390.........400.........410.........420
Sequence ALVAAATLSDRYITARFLPDKAIDLVDEAASRLRMEIDSRPKEEVGPDDIADVVSAWTGIPAGRLLEGET
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Known secondary structure (DSSP) T

SS
TT




SS



SS

TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence AKLLRMEDELGKRVIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFLFDDE
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Known secondary structure (DSSP) TGGGT

S
T
S
SSS
S

SSSSSS
T
 .........500.........510.........520.........530.........540.........550.........560
Sequence RAMVRIDMSEYGEKHTVARLIGAPPGYVGYEAGGQLTEAVRRRPYTVVLFDEIEKAHPDVFDVLLQVLDE
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Known secondary structure (DSSP) T
SGGG

SSGGGGGTT


TTSSS
TT

SSTT
TTTSS
TTSTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence GRLTDGHGRTVDFRNTILILTSNLGSGGSAEQVLAAVRATFKPEFINRLDDVLIFEGLNPEELVRIVDIQ
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Known secondary structure (DSSP)

TTS

TT

SSSSS
TTS
TTS






GGGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence LAQLGKRLAQRRLQLQVSLPAKRWLAQRGFDPVYGARPLRRLVQQAIGDQLAKMLLAGQVHDGDTVPVNV
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Known secondary structure (DSSP) TTSS



SS

TTTTTSTTTTTTTTSS

TT



 .......
Sequence SPDADSL
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Known secondary structure (DSSP)
SSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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