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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6w1sV_

Fold library idPDB HeaderMoleculeTitle
c6w1sV_4.02PDB header: gene regulationChain: V: PDB Molecule: mediator of rna polymerase ii transcription subunit 27;


Added to library: Sat Mar 13 08:33:53 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GVNLEAFSQAISAIQALRSSVSRVFDCLKDGMRNKETLEGREKAFIANFQDNLHSVNRDLNELERLSNLV
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Known secondary structure (DSSP)

TTS


S
SSS
TS




 .........80.........90.........100.........110.........120.........130.........140
Sequence GKPSENHPLHNSGLLSLDPYSQLLQAYKWSNKLQYHAGLASGLLNQQSLKRSANPQYVDDVISRIDRMFP
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Known secondary structure (DSSP)
STTSS

STTTT
TTT


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S


TTTST
 .........150.........160.........170.........180.........190.........200.........210
Sequence EMSIHLSRPNGTSAMLLVTLGKVLKVIVVMRSLFIDRTIVKGYNTEDGKLDIWSKSSYQVFQKVTDHATT
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Known secondary structure (DSSP) T


B



STT



BB
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TTS






SSS
 .........220.........230.........240.........250.........260......
Sequence ALLHYQLPQMPDVVVRSFMTWLRSYIKLFQAPCQRCGKFLQDGLPPTWRDFRTLEA
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Known secondary structure (DSSP) TT


SS
GGGG




TTS
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SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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