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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6w1sL_

Fold library idPDB HeaderMoleculeTitle
c6w1sL_4.02PDB header: gene regulationChain: L: PDB Molecule: mediator of rna polymerase ii transcription subunit 17;


Added to library: Sat Mar 13 08:29:04 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CEKQVQEVGLDGQPLSMSQNLARLAQRIDFSQDSVRNNLRSALTEMCVLYDVLSIVRKKFMTLSPQTLQL
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Known secondary structure (DSSP)


T
S





TT














 .........80.........90.........100.........110.........120.........130.........140
Sequence ISKKKSLAGAAQILLKGAERLTKSVAENQENKLQRDFNSELLRLRQHWKLRKVGDKILGDLSYRSAGSLF
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Known secondary structure (DSSP)
TTS
TTTS




SSS



S

TTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence PHHGTFEVIKNTDLDKKIPEDDLEGSAYIKVSIQKQAPDIGDLGTVNLSPHWQTKLEAAQNVLLCKEIFA
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S





S


S











S
 .........220.........230.........240.........250.........260.........270.........280
Sequence QLSREAVQIKSQIPHIVVKNQIISQPFPSLQLSISLCHSSDHLYVLEHNLHLLIREFHKQTVMPHPASAP
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Known secondary structure (DSSP) TT

TTS
B


SSB
SBTTB






TTT





SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence FGHKRMRLSGPQAFDKNEINSIQSTEGLLEKIIKQAKHIFLRSRTAATIDSLASRIEDPQIQAHWSNIND
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Known secondary structure (DSSP)
S
TTTTS

SSST



S
SSS



S


 .........360.........370.........380.........390.........400.........410.........420
Sequence VYESSVKVLITSQGYEQICKSIQLQLNIGVEQVRVVHRDGRVIMLSHQEQELQDFLLSQMSQHQVHAVQQ
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Known secondary structure (DSSP) SS





TT
STT


B

SSS


SSS


TT

 .........430.........440.........450.........460.........470.........480.........490
Sequence LAWQVLSFSNHVGLGPIESIGNASAITVASPSGDYAISVRNGPESGSKIMVQFPRNQCKDLPKSDVLQDS
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Known secondary structure (DSSP)




S

BS

S
SS

TTTS


B
SSS



SSSS



S

S


TTSSS
 .........500.........510.........520....
Sequence KWSHLRGPFKEVQWNKMEGRNFVYKMELLMSALS
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Known secondary structure (DSSP)


SS




B


SS


SSSGGGTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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