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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6vxkD_

Fold library idPDB HeaderMoleculeTitle
c6vxkD_3.10PDB header: membrane proteinChain: D: PDB Molecule: plexin-c1;


Added to library: Sat May 2 08:27:02 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EPVWRSEQAIGAIAASQEDGVFVASGSCLDQLDYSLEHSLSRLYRDQAGNCTEPVSLAPPARPRPGSSFS
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SS



SSS

SS
TTS
SSSSSS

S
SS





TTS



S
 .........80.........90.........100.........110.........120.........130.........140
Sequence KLLLPYREGAAGLGGLLLTGWTFDRGACEVRPLGNLSRNSLRNGTEVVSCHPQGSTAGVVYRAGRNNRWY
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Known secondary structure (DSSP)
STT
SSS


S
SS
SSS

S


SSSS

STTS
TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LAVAATYVLPEPETASRCNPAASDHDTAIALKDTEGRSLATQELGRLKLCEGAGSLHFVDAFLWNGSIYF
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Known secondary structure (DSSP)



S


SS


S

STTTTSSSTT



TTS




SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PYYPYNYTSGAATGWPSMARIAQSTEVLFQGQASLDCGHGHPDGRRLLLSSSLVEALDVWAGVFSAAAGE
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Known secondary structure (DSSP)
TTT



S

SSSS




TTSSS


GGGT


SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence GQERRSPTTTALCLFRMSEIQARAKRVSWDFKTAESHCKEGDQPERVQPIASSTLIHSDLTSVYGTVVMN
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Known secondary structure (DSSP) SSSS

TTS
B

SSSS

TTS
TTSS






TTT
S


SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence RTVLFLGTGDGQLLKVILGENLTSNCPEVIYEIKEETPVFYKLVPDPVKNIYIYLTAGKEVRRIRVANCN
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Known secondary structure (DSSP)

TTS

SSS





TT


B
S


SSSTTTTS

TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence KHKSCSECLTATDPHCGWCHSLQRCTFQGDCVHSENLENWLDISSGAKKCPKIQITVTMVGSFSPRHSKC
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Known secondary structure (DSSP) S

STT

TT
TTTT
STTTTTSS
GGG
TTT
GGGS



S

S
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence MVKELCQNKCTCNVMFSFGSWNLSDRLQVFYIKSIEPQKVSTLGKSNVIVTGANFTRASNITMILKGTST
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SS






STT

TTS
S


SSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence CDKDVIQVSHVLNDTHMKFSLPSSRKEMKDVCIQFDGGNCSSVGSLSYIALPHCSLIFPATTWISGGQNI
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Known secondary structure (DSSP) S


SS

STT



S

SSSS




SS
TT

S
 .........640.........650.........660.........670.........680.........690.........700
Sequence TMMGRNFDVIDNLIISHGNINVSEYCVATYCGFLAPSLTNVTVKLRVQDTYLDCGTLQYREDPRFTGYRT
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Known secondary structure (DSSP) S

TT










SS




TT





 .........710.........720.........730.........740.......
Sequence ELEVKIQNFNISKKDIEITLQLNCSFENTILCKIKKVRVKLGNLELY
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Known secondary structure (DSSP)






GGG







TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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