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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6vvoA_

Fold library idPDB HeaderMoleculeTitle
c6vvoA_3.40PDB header: dna binding protein, replicationChain: A: PDB Molecule: replication factor c subunit 1;


Added to library: Sat Feb 29 08:35:56 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KVENLLWVDKYKPTSLKTIIGQQGDQSCANKLLRWLRNWQKSSDDGSSFKAALLSGPPGVGKTTTASLVC
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Known secondary structure (DSSP)



S
TS

SSTT
SS

STT
TGGGT



TT
S
STTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNSVSTKHALIMDEVDGMAGNEDRGGIQELIG
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Known secondary structure (DSSP) TT

TTS


TTS

GGGT









GGG

SSTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQ
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Known secondary structure (DSSP) T
SS

S
SS
TTGGGS




T



TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DIRQVLHNLSMWCARSKALMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVA
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Known secondary structure (DSSP)
T


TS

SSSTTT

TSTTTGGG


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence AGGDMKKHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYMTQFPTFPSWLGKH
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Known secondary structure (DSSP) S
S
TT
TTSTTS
S


S





 .........360.........370.........380.........390.........400.........410.........420
Sequence SSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSLLRDALVQPLTSQGVDGVQDVVALMDTYYLMKEDFE
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Known secondary structure (DSSP) TT
SS


SSS
TT

 .........430.........440........
Sequence NIMEISSWGGKPSPFSKPKVKAAFTRAY
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Known secondary structure (DSSP) TTS
TTS


TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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