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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6vtlC_

Fold library idPDB HeaderMoleculeTitle
c6vtlC_3.65PDB header: transport proteinChain: C: PDB Molecule: acid-sensing ion channel 1;


Added to library: Sat Mar 14 08:29:08 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VSIQAFASSSTLHGISHIFSYERLSLKRVVWALCFMGSLALLALVCTNRIQYYFLYPHVTKLDEVAATRL
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Known secondary structure (DSSP)

TSSS
SSS
SS


TTTT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TFPAVTFCNLNEFRFSRVTKNDLYHAGELLALLNNRYEIPDTQTADEKQLEILQDKANFRNFKPKPFNML
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Known secondary structure (DSSP)

SSSS
STT

TTSTTTTTSS
TTSS



TT

TTT

SS






 .........150.........160.........170.........180.........190.........200.........210
Sequence EFYDRAGHDIREMLLSCFFRGEQCSPEDFKVVFTRYGKCYTFNAGQDGKPRLITMKGGTGNGLEIMLDIQ
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Known secondary structure (DSSP) SS


S

TT

GGG
TTTT


TT



S

STTSSB


 .........220.........230.........240.........250.........260.........270.........280
Sequence QDEYLPVWGETDETSFEAGIKVQIHSQDEPPLIDQLGFGVAPGFQTFVSCQEQRLIYLPPPWGDCKATTG
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Known secondary structure (DSSP) GGGS



S

SS




S
SSS




TT


TTTS

B
S

 .........290.........300.........310.........320.........330.........340.........350
Sequence DSEFYDTYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDNEYCVCEMPC
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Known secondary structure (DSSP)

SS
SS

SSB
TT

SS

B

TTTSGGG




BS
 .........360.........370.........380.........390.........400.........410.........420
Sequence NVTRYGKELSMVKIPSKASAKYLAKKYNKSEQYIGENILVLDIFFEALNYETIEQKKAYEVAGLLGDIGG
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Known secondary structure (DSSP)


GGGTTT

SSSS

TTT
 .........430.........440......
Sequence QMGLFIGASILTVLELFDYAYEVIKH
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Known secondary structure (DSSP) T


TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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