Fold library entry viewer: c6vsbA_

Added to library: Sat Feb 29 09:28:55 2020
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	Y	T	N	S	F	T	R	G	V	Y	Y	P	D	K	V	F	R	S	S	V	L	H	S	T	Q	D	L	F	L	P	F	F	S	N	V	T	W	F	H	F	D	N	P	V	L	P	F	N	D	G	V	Y	F	A	S	T	N	I	I	R	G	W	I	F	G	T	T	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S				B		S	S	S					S	S											T	T													B			T	T																	S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	K	T	Q	S	L	L	I	V	N	N	A	T	N	V	V	I	K	V	C	E	F	Q	F	C	N	D	P	F	L	G	E	F	R	V	Y	S	S	A	N	N	C	T	F	E	Y	V	S	Q	P	F	L	K	N	L	R	E	F	V	F	K	N	I	D	G	Y	F	K	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S									S	S								B					S	S													B	T								S															T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	K	H	T	P	I	N	L	V	R	D	L	P	Q	G	F	S	A	L	E	P	L	V	D	L	P	I	G	I	N	I	T	R	F	Q	T	L	L	A	L	H	R	G	A	A	A	Y	Y	V	G	Y	L	Q	P	R	T	F	L	L	K	Y	N	E	N	G	T	I	T	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S				S				B							B																																					T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	D	C	A	L	D	P	L	S	E	T	K	C	T	L	K	S	F	T	V	E	K	G	I	Y	Q	T	S	N	F	R	V	Q	P	T	E	S	I	V	R	L	C	P	F	G	E	V	F	N	A	T	R	F	A	S	V	Y	A	W	N	R	K	R	I	S	N	C	V	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S	T	T								T		S	S			S														S								T					S		S				B	G	G	G								S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	S	V	L	Y	N	S	A	S	F	S	T	F	K	C	Y	G	V	S	P	T	K	L	N	D	L	C	F	T	N	V	Y	A	D	S	F	V	I	R	G	D	E	V	R	Q	I	A	P	G	Q	T	G	K	I	A	D	Y	N	Y	K	L	P	D	D	F	T	G	C	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	T	S	S		S		S						S	S		G	G	G	G	G	G				S											S	G	G	G	G	G	S	S	T	T			S						T					S	S			S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	W	N	S	N	N	L	D	S	Y	N	Y	L	Y	R	P	L	Q	S	Y	G	F	Q	P	T	V	G	Y	Q	P	Y	R	V	V	V	L	S	F	E	L	L	H	A	P	A	T	V	C	G	P	K	K	S	T	N	L	V	K	N	K	C	V	N	F	N	F	N	G	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T																			T	T	S												S	S	S	S															S	S							S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	T	G	V	L	T	E	S	N	K	K	F	L	P	F	Q	Q	F	G	R	D	I	A	D	T	T	D	A	V	R	D	P	Q	T	L	E	I	L	D	I	T	P	C	S	F	G	G	V	S	V	I	T	P	G	T	N	T	S	N	Q	V	A	V	L	Y	Q	D	V	N	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S				T	T		S				S	S	T	T								T	T	T																			S		T	T	T										S			T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	E	V	S	N	V	F	Q	T	R	A	G	C	L	I	G	A	E	H	V	N	N	S	Y	E	C	D	I	P	I	G	A	G	I	C	A	V	A	S	Q	S	I	I	A	Y	T	M	S	L	G	A	E	N	S	V	A	Y	S	N	N	S	I	A	I	P	T	N	F	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T									T	T					S					S	S		B			S	S				T	T						S	S	S						B			S									S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	S	V	T	T	E	I	L	P	V	S	M	T	K	T	S	V	D	C	T	M	Y	I	C	G	D	S	T	E	C	S	N	L	L	L	Q	Y	G	S	F	C	T	Q	L	N	R	A	L	T	G	I	A	V	E	Q	D	K	N	T	Q	E	V	F	A	Q	V	K	Q	I	Y	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T		S									G	G	G	T	T																												S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	P	P	I	K	D	F	G	G	F	N	F	S	Q	I	L	P	D	P	S	K	R	S	F	I	E	D	L	L	F	N	K	V	T	L	Q	K	F	N	G	L	T	V	L	P	P	L	L	T	D	E	M	I	A	Q	Y	T	S	A	L	L	A	G	T	I	T	S	G	W	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S			S	T	T				T	T	T	S	B		T	T			B								T	T	S						S	S							S	S																			T	G	G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	F	G	A	G	A	A	L	Q	I	P	F	A	M	Q	M	A	Y	R	F	N	G	I	G	V	T	Q	N	V	L	Y	E	N	Q	K	L	I	A	N	Q	F	N	S	A	I	G	K	I	Q	D	S	L	S	S	T	A	S	A	L	G	K	L	Q	D	V	V	N	Q	N	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T	S	S																		T	S		T						T																							T	T	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	L	N	T	L	V	K	Q	L	S	S	N	F	G	A	I	S	S	V	L	N	D	I	L	S	R	L	D	P	P	E	A	E	V	Q	I	D	R	L	I	T	G	R	L	Q	S	L	Q	T	Y	V	T	Q	Q	L	I	R	A	A	E	I	R	A	S	A	N	L	A	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G			T	T	S	S		S								T	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	K	M	S	E	C	V	L	G	Q	S	K	R	V	D	F	C	G	K	G	Y	H	L	M	S	F	P	Q	S	A	P	H	G	V	V	F	L	H	V	T	Y	V	P	A	Q	E	K	N	F	T	T	A	P	A	I	C	H	D	G	K	A	H	F	P	R	E	G	V	F	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	S	S				S	T	T	S	S	S	S	S											S	S																					S					T	T						S	S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.
Sequence	N	G	T	H	W	F	V	T	Q	R	N	F	Y	E	P	Q	I	I	T	T	D	N	T	F	V	S	G	N	C	D	V	V	I	G	I	V	N	N	T	V	Y	D	P	L	Q	P	E	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T							T	T	S							B	G	G	G							S	S	S	S	T	T							B		T					T

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PDB structure

FASTA sequence

Hidden Markov model

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