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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6vqxD_

Fold library idPDB HeaderMoleculeTitle
c6vqxD_3.15PDB header: rna binding protein/rna/inhibitorChain: D: PDB Molecule: crispr-associated protein csy3;


Added to library: Sat Mar 14 08:19:58 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSTASVLAFERKLDPSDALMSAGAWAQRDASQEWPAVTVREKSQTVDVANLPSDADTLKVRFTLRVLGGA
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Known secondary structure (DSSP)



S



S




TT

TT
SS

B






B

TT




T
 .........80.........90.........100.........110.........120.........130.........140
Sequence GTPSACNDAAYRDKLLQTVATYVNDQGFAELARRYAHNLANARFLWRNRVGAEAVEVRINHIRQGEVARA
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Known secondary structure (DSSP) T

SS
S
STTTTSTTTSTT
S
SSSS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence WRFDALAIGLRDFKADAELDALAELIASGLSGSGHVLLEVVAFARIGDGQEVFPSQELKTLYSVRDAAAI
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Known secondary structure (DSSP) TTTS
SSS



TTSS


TT
B



B



B
BSSSSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence HSQKIGNALRTIDTWYPDEDGLGPIAVEPYGSVTSQGKAYRQPKQKLDFYTLLDNWVLRDEAPAVEQQHY
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Known secondary structure (DSSP)
TTT



SS
STT



SS
B
TTT

B
S
SSSTT
TTS




 .........290...
Sequence VIANLIRGGVFGE
Predicted secondary structure






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Known secondary structure (DSSP) TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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