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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6vq7A_

Fold library idPDB HeaderMoleculeTitle
c6vq7A_4.00PDB header: proton transportChain: A: PDB Molecule: atpase h+-transporting v1 subunit a;


Added to library: Sat Mar 21 08:45:51 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TFGYVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETSGVSVGDPVLRTGKPL
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Known secondary structure (DSSP)
SSSS

S

TT
TTTTTTSS

TT

TT
SS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence SVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPRGVNVSALSRDIKWEFIPSKNLRVGSHITGGDIYGIV
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Known secondary structure (DSSP) STT
TT

TTS
BS

SS

TT



SS
SS


SS

TT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence NENSLIKHKIMLPPRSRGSVTYIAPPGNYDASDVVLELEFEGVKEKLSMVQVWPVRQVRPVTEKLPANHP
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Known secondary structure (DSSP)
SSS


SS



S
TTS

TT
S
TTS



S



SB
 .........220.........230.........240.........250.........260.........270.........280
Sequence LLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTM
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Known secondary structure (DSSP)


S
STTTSSS

BTT
B

GGG
T
S
S

SB
GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence EVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLA
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Known secondary structure (DSSP) SSSSGGGS

BTTS
TTT
S
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence EMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLD
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Known secondary structure (DSSP)

B
GGG
BTTT

SSTT





GGG
S
STT
S

B
 .........430.........440.........450.........460.........470.........480.........490
Sequence KKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDK
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Known secondary structure (DSSP) STT
SS
B
SSS
S
TTTTTSST
SSS

 .........500.........510.........520.........530.........540.........550.........560
Sequence ITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMISFYDMARRAVETTAQSDNKITWSIIREHMGE
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Known secondary structure (DSSP) TT


TTSTTSS


TT
SSSS


T
 .........570.........580.........590.........600
Sequence ILYKLSSMKFKDPVKDGEAKIKADYAQLLEDMQNAFRSLE
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Known secondary structure (DSSP) GGG

TTTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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