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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6vg4A_

Fold library idPDB HeaderMoleculeTitle
c6vg4A_3.30PDB header: cell adhesionChain: A: PDB Molecule: protocadherin-10;


Added to library: Sat Mar 14 09:00:11 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARGFQTVPNSRTPYLDLNLETGVLYVNEKIDREQICKQ
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Known secondary structure (DSSP)
SS

TT
T

TTT

TTT

TTTTTT
S


TSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence SPSCVLHLEVFLENPLELFQVEIEVLDINDNPPSFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLR
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Known secondary structure (DSSP)
S

TTTT

S



B
S
STT

TT




B
SS
GGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DYEITPNSYFSLDVQTQGDGNRFAELVLEKPLDREQQAVHRYVLTAVDGGGPQQQRTGTALLTIRVLDSN
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Known secondary structure (DSSP)


SS


STT


S


TTT
S









S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DNVPAFDQPVYTVSLPENSPPGTLVIQLNATDPDEGQNGEVVYSFSSHISPRARELFGLSPRTGRLEVSG
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Known secondary structure (DSSP)



S
STT

TT





SGGGG

TTS

TTT

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ELDYEESPVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISFSTVKEAVSEGAAPGTVVALFSVTD
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Known secondary structure (DSSP)


TTT
SSSTT




S





TT

TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence RDSEENGQVQCELLGDVPFRLKSSFKNYYTIVTEAPLDREAGDSYTLTVVARDRGEPALSTSKSIQVQVS
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Known secondary structure (DSSP)


GGGG
SS
SSSTTSS


TTT
SSSSS

 .........430.........440.........450.........460.........470.........480.........490
Sequence DVNDNAPRFSQPVYDVYVTENNVPGAYIYAVSATDRDEGANAQLAYSILECQIQGMSVFTYVSINSENGY
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Known secondary structure (DSSP)

S



S
STT

TT



S
GGGG



TTGGGT
TTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LYALRSFDYEQLKDFSFQVEARDAGSPQALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSA
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Known secondary structure (DSSP)
S


TTT



SSS



S
S

S


SSS


SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence EPGYLLTRVAAVDADDGENARLTYSIVRGNEMNLFRMDWRTGELRTARRVPAKRDPQRPYELVIEVRDHG
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Known secondary structure (DSSP)
TT


SS
GGGT


SS
SSS

TTT
SS

TT
SS
SS


S
 .........640......
Sequence QPPLSSTATLVVQLVD
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SS confidence















Known secondary structure (DSSP) SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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