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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6vfuC_

Fold library idPDB HeaderMoleculeTitle
c6vfuC_3.50PDB header: cell adhesionChain: C: PDB Molecule: protocadherin-19;


Added to library: Sat Mar 14 09:17:41 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LINLKYSVEEEQRAGTVIANVAKDAREAGFALDPRQASAFRVVSNSAPHLVDINPSSGLLVTKQKIDRDL
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 .........80.........90.........100.........110.........120.........130.........140
Sequence LCRQSPKCIISLEVMSSSMEICVIKVEIKDLNDNAPSFPAAQIELEISEAASPGTRIPLDSAYDPDSGSF
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B
SSSTT

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B

S
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence GVQTYELTPNELFGLEIKTRGDGSRFAELVVEKSLDRETQSHYSFRITALDGGDPPRLGTVGLSIKVTDS
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SSSSSS

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 .........220.........230.........240.........250.........260.........270.........280
Sequence NDNNPVFSESTYAVSVPENSPPNTPVIRLNASDPDEGTNGQVVYSFYGYVNDRTRELFQIDPHSGLVTVT
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S
STT

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SSGGGG

S
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TTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence GALDYEEGHVYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSESAPPGYVIALV
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Known secondary structure (DSSP) S


TTT
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S
S


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TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence RVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYNLTIQARDGGVPMLQSAKSFTV
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GGGT

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S


TTT
SSSSS

 ........
Sequence LITDHHHH
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Known secondary structure (DSSP) SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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