PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6ve2U_

Fold library id	PDB Header	Molecule	Title
c6ve2U_	4.30	PDB header: protein transport	Chain: U: PDB Molecule: lysm domain-containing protein;

Links to external resources
Added to library: Mon Jan 4 15:17:15 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P L D K I N S F L L A N R I V D D E K T F T S A P Y I V A G N A E R I V S G T G D R I Y A R G K F A D G Q P A Y G I F R Q G K V Y I D P K T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
T T T T
S
S S
S S
S S
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K E V L G I N A D D I G G G E V V A T E G D V A T L A L T R T T Q E V R L G D R L F P T E E R A V N S T F M P G E P S R E V K G E I I D V P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
T T
G G G T T
B
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R G V T Q I G Q F D V V T L N R G Q R D G L A E G N V L A I Y K V G E T V R D R V T G E S V K I P D E R A G L L M V F R T Y K K L S Y A L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S
B
T T T T
T T S

. . . . . . . . . 220 . . . . .

Sequence L M A S R P L S V T D R V Q N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	L	D	K	I	N	S	F	L	L	A	N	R	I	V	D	D	E	K	T	F	T	S	A	P	Y	I	V	A	G	N	A	E	R	I	V	S	G	T	G	D	R	I	Y	A	R	G	K	F	A	D	G	Q	P	A	Y	G	I	F	R	Q	G	K	V	Y	I	D	P	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S								S							T	T	T	T		S			S	S							S					S		S	S													T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	E	V	L	G	I	N	A	D	D	I	G	G	G	E	V	V	A	T	E	G	D	V	A	T	L	A	L	T	R	T	T	Q	E	V	R	L	G	D	R	L	F	P	T	E	E	R	A	V	N	S	T	F	M	P	G	E	P	S	R	E	V	K	G	E	I	I	D	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	S										S					T	T													G	G	G	T	T			B		T	T									S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	G	V	T	Q	I	G	Q	F	D	V	V	T	L	N	R	G	Q	R	D	G	L	A	E	G	N	V	L	A	I	Y	K	V	G	E	T	V	R	D	R	V	T	G	E	S	V	K	I	P	D	E	R	A	G	L	L	M	V	F	R	T	Y	K	K	L	S	Y	A	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T			S																			B												T	T	T	T																				T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	L	M	A	S	R	P	L	S	V	T	D	R	V	Q	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S					S	S