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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6vcgC_

Fold library idPDB HeaderMoleculeTitle
c6vcgC_2.30PDB header: oxidoreductaseChain: C: PDB Molecule: carotenoid cleavage dioxygenase;


Added to library: Sat Jul 11 08:35:10 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NKFQLGFSTLSEELDLESLQVKGTIPKWLSGTLIRNGPAKFEVGKEKFQHWFDGLAMLHKFSFKEGKVSY
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Known secondary structure (DSSP)

SGGGGS





S





TT

S
TT

BGGGSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ANKFLESKAYQSARDTDKISYREFATDPCKFTDNANVNVTKIAERFVAMTETPLPVEFDINTLKTVGVFA
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Known secondary structure (DSSP)


SS

S

SS










STT
SSS


TTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence YDDKIESGLTTAHPHYDFVKNELVNYATKISRSSNYNVYKIADKTNHRNLIGSIPVEEPAYMHSFAMTEN
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Known secondary structure (DSSP)
SS



S
S

TTTT
STT
TT




SS
B

S


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence YVVLVEYPFVVKPLDLLLSGKPFIENFSWKPENGTRFIIVNRQNGNLVGTYKSDAFFAFHHVNAFEKQEE
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Known secondary structure (DSSP)
S

SS
GGGG
GGG
TTT

S

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence IFVDIIAYQDSSIVNALYLDILRGQKTDTIPTSHIRRYRIPLSGGQVEYEMLSSEAVELPRINYKQYNTK
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Known secondary structure (DSSP) SSSTTBTTSS






TT



S
SS



TBS
 .........360.........370.........380.........390.........400.........410.........420
Sequence DYRFVYGISTYSASDFANQLVKIDILRKSSKIWSEKDCYPGEPVFVGAPDATKEDEGLILSAVLDATNAK
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Known secondary structure (DSSP)



SSTTTSS
TTTT

TT



TT

STT
TTTT
 .........430.........440.........450...
Sequence SFLLILDATTFEEVARAEVPHHIPFGFHGNYFE
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Known secondary structure (DSSP) TTT


SS








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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