Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6vcdB_

Fold library idPDB HeaderMoleculeTitle
c6vcdB_3.00PDB header: ligaseChain: B: PDB Molecule: f-box/lrr-repeat protein 5;


Added to library: Sat Aug 8 08:31:59 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHLYPVHWARGDWYSGPAQMEKRLLHGLI
Predicted secondary structure


































SS confidence





































































Known secondary structure (DSSP)

SS
TTSS
GGGT
S
SSTT
S
TTT







TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence HNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDSWSWLGCCQSLRHLDLS
Predicted secondary structure

























































SS confidence





































































Known secondary structure (DSSP) TTS
S



TT
SS

STTTTT
TT


TT



TTTTTT

SSSTT
S


T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GCEKITDVALEKISRALGILGRVLLFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTITGAGLQD
Predicted secondary structure


















































SS confidence





































































Known secondary structure (DSSP) T
TT
BTTTTTT










S
TB

TTSSSS

SS



TT
TT

 .........220.........230.........240.........250.....
Sequence LVSACPSLNDEYFYYCDNINGPHADTASGCQNLQCGFRACCRSGE
Predicted secondary structure



























SS confidence












































Known secondary structure (DSSP) TT
TT

STT

SSS

S
TTTS


S
TT
SSS

SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D