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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6vbv5_

Fold library idPDB HeaderMoleculeTitle
c6vbv5_3.50PDB header: protein transportChain: 5: PDB Molecule: bardet-biedl syndrome 5 protein homolog;


Added to library: Sat Feb 1 08:20:37 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALWEDRDVRFDVSSQQMKTRPGEVLIDCLDSVEDTKGNNGDRGRLLVTNLRIVWHSLALPRVNLSIGYNC
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Known secondary structure (DSSP)


TTT
S

TTTTS

SS



SSSTT




SS
SSSTTSGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence ILNITTRTANSKLRGQTEALYVLTKCNSTRFEFIFTNLVPGSPRLYTSLIAVHRAYETSKMYRDFKLRSA
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Known secondary structure (DSSP)

B

TTS

B
SSS

STT

TS

TTTS
S
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LIQNKQLRLLPQENVYNKINGVWNLSSDQGNLGTFFITNVRIVWHANMNDSFNVSIPYLQIRSVKIRALV
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Known secondary structure (DSSP)
B
SSSB


TT



TTSSSS

SS

SSSTT

TTT



 .........220.........230.........240.........250.........260.........270.........280
Sequence IESSQQSGGYVLGFKIDPVEKLQESVKEINSLHKVYSANPIFGVDYTDAFVAYFADGNKQQDREPVFSEE
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Known secondary structure (DSSP)
SSS
S

B



SSS

TT




SGGG
BSSSS






TT
 .........290.........300
Sequence LGLAIEKLKDGFTLQGLWEV
Predicted secondary structure








SS confidence



















Known secondary structure (DSSP) TSS


TT

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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