Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6vbu4_

Fold library idPDB HeaderMoleculeTitle
c6vbu4_3.10PDB header: protein transportChain: 4: PDB Molecule: bardet-biedl syndrome 4 protein homolog;


Added to library: Sat Feb 1 09:48:59 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KQNWLIHLYYIQKDYEACKAVIKEQLQETHGLCEYAIYVQALIFRLEGNIQESLRLFQMCAFLSPQCADN
Predicted secondary structure
















SS confidence





































































Known secondary structure (DSSP)

TTT

SSS

SSTT
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LKQVARSLFLLGKHKAAIEVYNEAAKLNQKDWEICHNLGVCYIYLKQFDKAQDQLHNALHLNRHDLTYIM
Predicted secondary structure



























































SS confidence





































































Known secondary structure (DSSP) TSS


S

TT
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence LGKIFLLKGDLDKAIEIYKKAVEFSPENTELLTTLGLLYLQLGIYQKAFEHLGNTLTYDPTNYKAILAAG
Predicted secondary structure





































































SS confidence





































































Known secondary structure (DSSP) S
SSTT
SS

STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SMMQTHGDFDVALTKYKVVACAVIESPPLWNNIGMCFFGKKKYVAAISCLKRANYLAPLDWKILYNLGLV
Predicted secondary structure





































































SS confidence





































































Known secondary structure (DSSP) TS
TTTSSS
TT
T
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence HLTMQQYASAFHFLSAAINFQPKMGELYMLLAVALTNLEDSENAKRAYEEAVRLDKCNPLVNLNYAVLLY
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TT

SS

S
TTT


SS
T
 .........360.........370.........380......
Sequence NQGEKRDALAQYQEMEKKVSSSLEFDPEMVEVAQKL
Predicted secondary structure








SS confidence



































Known secondary structure (DSSP) TT

SSTT



TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D