Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6v8qA_

Fold library idPDB HeaderMoleculeTitle
c6v8qA_2.70PDB header: membrane proteinChain: A: PDB Molecule: inner membrane protein yejm;


Added to library: Sat Mar 21 09:03:57 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RYREKVSQMVSWGHWFALFNILLATLLGSRYLFVADWPTTLAGRIYSYLSIVGHFSFLVFATYLLILFPL
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP)

TS


SSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TFIVMSQRLMRFLSAILATAGMTLLLIDSEVFTRFHLHLNPIVWELVINPARDWQLMFISVPVILLIEML
Predicted secondary structure






SS confidence





































































Known secondary structure (DSSP) S

S

S



 .........150.........160.........170.........180.........190.........200.........210
Sequence FATWSWQKLRSLHFARPLAAFFFVSFIASHLIYIWADANFYRPITMQRANLPLSYPMTARRFLEKHGLLD
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP) TTT


TTTT
TTTTTSTT





S
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence AQEYQRRLVEQGNPEAVSVQYPLSNLHYRDMGTGQNVLLITVDGLNYSRFEKQMPELVTFAEQNIDFTRH
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)
S

TT


B
SSSS


BSSS




S
B
STT
TSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence MSSGNTTDNGIFGLFYGISPGYMDGVLSTRTPAALITALNQQGYQLGLFSSDGFASPLYRQALLSDFSMP
Predicted secondary structure











































SS confidence





































































Known secondary structure (DSSP)
S
SS
S
GGGT


TT
SS
S
STTTTT



 .........360.........370.........380.........390.........400.........410.........420
Sequence AAQTQSDAQTASQWIDWLGRYAQEDNRWFSWISFNGTNIDSNQKNFVKRYASAASDVDAQINRVLNALRE
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)





STT
SSS

TT




TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence AGKFDNTVVIITAGRGIPLTPEENRFDWSQGHLQVPLVIHWPGTPAQRINVLTDHTDVMTTLMQRLLHVS
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) TT
STTSSSB


STTTTSSTT
B


TTS
S
S
TT
B
 .........500.........510.........520.........530.........540.........550.........560
Sequence TPANEYSQGQDIFTVPRRHNWVTAADGSTLAITTPQMTLVLNNNGHYQTYDLHGEKIKDQPQLSLLLQVL
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) S
GGGT
S


TTSSS
S
S
TT
SS
TTS

TTS





 .........
Sequence TEEKRFIAN
Predicted secondary structure

SS confidence








Known secondary structure (DSSP) TTTB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D