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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6v81A_

Fold library idPDB HeaderMoleculeTitle
c6v81A_2.96PDB header: transport proteinChain: A: PDB Molecule: probable tonb-dependent receptor yncd;


Added to library: Sat May 9 12:41:07 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ELDTPAAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIRGIRLYVD
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Known secondary structure (DSSP)

S
SSSTTTS
SS
GGGTSTTSTT

S
TTS

TTBTTT
SSSB
SST
 .........80.........90.........100.........110.........120.........130.........140
Sequence GIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQQPPTIEASSYYGSFGSWRY
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Known secondary structure (DSSP) TSB
TTS
B

TT

GGGSGGGGGG
TT
S



SS
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLKATGATGDGQPGDVDYTVSTTRFTTHGYRDHSGAQKNLANAKLGVRIDESKLSLIFNSVDIKADDPGG
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Known secondary structure (DSSP) SS


TT


SSSS









 .........220.........230.........240.........250.........260.........270.........280
Sequence LTKAEWKANPQQAPRAEQYDTRKTIKQTQAGLRYERSLSSRDDMSVMMYAGERETTQYQSIPMAPQLNPS
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Known secondary structure (DSSP) B

SS

T

SSS



TTGGGSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence HAGGVITLQRHYQGIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFREYGQKGELRRDERNLMWNI
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Known secondary structure (DSSP)


S


SSSS
S



SS

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence DPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPAGSLKYAMTDAWNIYLAA
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Known secondary structure (DSSP) TT


BTTB



SSSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence GRGFETPTINELSYRADGQSGMNLGLKPSTNDTIEIGSKTRIGDGLLSLALFQTDTDDEIVVDSSSGGRT
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Known secondary structure (DSSP)




S

TT

SS

TT




TTBS
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence TYKNAGKTRRQGAELAWDQRFAGDFRVNASWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPE
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Known secondary structure (DSSP)


TTTSS


SSS

TT
B
TT
BS

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence DGWYAGTEARYMGDIMADDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEYVGSVIVNESN
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Known secondary structure (DSSP) SS




SS




TTSTT



TT
TT
 .........640.........650..
Sequence GRYYEPSPGRNYGVGMNIAWRF
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Known secondary structure (DSSP) S


SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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