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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6v4sE_

Fold library idPDB HeaderMoleculeTitle
c6v4sE_3.55PDB header: transport proteinChain: E: PDB Molecule: neur_chan_lbd domain-containing protein;


Added to library: Sat Jun 6 08:34:17 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EGRVQHFTGYIEDGRGIFYSLPDMKQGDIIYASMQNTGGNLDPLVGIMAEEIDPAVSLGQVLEKALDLIS
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Known secondary structure (DSSP)

SSS


TT
S

SS


S



 .........80.........90.........100.........110.........120.........130.........140
Sequence ELTAVADRIFLGWDDDGGKGYSASLEFTIPRDGTYHIFAGSTITNQRLDKFQPTYTTGSFQLILGLNAPQ
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Known secondary structure (DSSP)
S
STTTTTS

SS



SS





S
GG
 .........150.........160.........170.........180.........190.........200.........210
Sequence VISGEGEPEGEVFASLASKPEAHVQELEIRLDKDTRYLTQHTRNLQPGDTFHALVEPIGEAPLPRLRLTD
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Known secondary structure (DSSP) GGGT



BSS









SS

B



TT
SSS



 .........220.........230.........240.........250.........260.........270.........280
Sequence SGGKPLAFGLIDQPGESVELNYTCDQDICELVVHVDGTDGQKDSGEAVYRLLVGINAPNLVGSSVFLESD
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Known secondary structure (DSSP) TT



SSSS


SSS



SS

STT
S





S

B


 .........290.........300.........310.........320.........330.........340.........350
Sequence LVTVGLAVDQIVGVDQRSENFSVVGTLKLSWHDPKLGFSPDQCGCTVKSFEDASIRAVAGEINLPLPSFS
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Known secondary structure (DSSP) TTTT
TTS


TSS
SS
TS



 .........360.........370.........380.........390.........400.........410.........420
Sequence FYNQQGNRWSQNQVIFVTPDGRASYFERFTVTLQAPDFDFLAYPFDRQKFSIKVDLAVPTNMFIFNEIER
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Known secondary structure (DSSP) TTB
S


TTS
TT


TTTTS
SS
TTT

 .........430.........440.........450.........460.........470.........480.........490
Sequence FQQVVGDQLGEEEWVVTSYSQEITEVPFERGSTNSRFTTTLLVKRNLEYYILRIFVPLFLIISVSWVIFF
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Known secondary structure (DSSP)
S
SB


TTT
STTT
TTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LKDYGRQLEVASGNLLVFVAFNFTISGDLPRLGYLTVLDRFMIVSFCLTAIVVLISVCQKRLGAVGKQAV
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Known secondary structure (DSSP)


TTTTS


SS

TT
 .........570.........580.........590.
Sequence AAQIDTWVLVIYPLVYSLYIIWVYLRFFTDH
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Known secondary structure (DSSP) S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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