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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6v47E_

Fold library idPDB HeaderMoleculeTitle
c6v47E_2.80PDB header: viral proteinChain: E: PDB Molecule: hemagglutinin ha1 chain;


Added to library: Sat Jun 20 08:20:55 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DEICIGYLSNNSTEKVDTIIESNVTVTSSVELVENEYTGSFCSIDGKAPISLGDCSFAGWILGNPMCDDL
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Known secondary structure (DSSP)









S




SS
SS
S





SSBTTB


TTB
T
TT
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence IGKTSWSYIVEKPNPINGICYPGTLENEEELRLKFSGVLEFNKFEAFTSNGWGSVNSGAGVTAACKFGSS
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Known secondary structure (DSSP) TT

B
S

SS
SBSSSSSTTSSS
TT
SSSSBSS


SSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NSFFRNMVWLIHQSGTYPVIRRTFNNTKGRDVLMVWGVHHPATLKEHQDLYKKDNSYVAVGSESYNRRFT
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Known secondary structure (DSSP)

TT
B
BTTB




SSS

SSSSS


SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence PEISTRPKVNGQAGRMTFYWTIVKPEEAITFESNGAFLAPRYAFELVSLGNGKLFRSDLNIESCSTKCQS
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Known secondary structure (DSSP)







BTTBS

TT
SSS
SS


S


S
 .........290.........300.........310.........320.
Sequence EIGWINTNRSFHSVHRNTIGDCPKYVNVKSLKLATGLRNVP
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Known secondary structure (DSSP) TT

S
S
S
S
S


S
S


S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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