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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6v1vB_

Fold library idPDB HeaderMoleculeTitle
c6v1vB_3.19PDB header: toxinChain: B: PDB Molecule: vegetative insecticidal protein;


Added to library: Sat Dec 21 08:21:41 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DYFNGIYGFATGIKDIMGMIFKTDTGGNLTLDEILKNQNLLNDISGKLDGINGDLGDLIAQGNLNSELAK
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Known secondary structure (DSSP)

B
T







S


GGGTT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ELLKISNEQNQMLNHVNAQLNAINSTLNIYLPKITSMLNEVMKQNHVLSLQIEFLSKQLQEISDKLDNVL
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Known secondary structure (DSSP) TTTTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence INSTLTEITPAYQRIKYVNEKFDELTSTVEKNPKSYQDNVTKEVIENLNELTELAKSVTKNDMDSFEFYL
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Known secondary structure (DSSP) TTS


GGGGSSS



STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QTFHDVMTGNNLFGRSALKTASELITKENVTTRGSEIGKVYNFLIVLTSLQAKAFLTLTACRKLLGLTDI
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Known secondary structure (DSSP) T
SSS


T
SS

SS
TT



 .........290.........300.........310.........320.........330.........340.........350
Sequence DYTQIMNHHIDGQKREFRINILPTLSNNFSNPSYSKNRGSDIDDPIVVLEAAPGYALIGFEILNDPLPIL
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Known secondary structure (DSSP)
TTGGGS


S


SS



TT
SSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence KGYQARLKPNYQVDRESMSETIYGDIHKLFCPKQLEQKYYIKDIEFPEGYVITKIVFEKRLNQLGYEVTA
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Known secondary structure (DSSP)
GGG



SSS




TTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence NFYDPSTGSIDLNKVKVESSDEYSIIKAETDGIYMPLGVVSETFLTPIYGFGLTVDNAAITLTGKSYLRE
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Known secondary structure (DSSP)
TTT







SS
S
SB





B
 .........500.........510.........520.........530.........540.........550.........560
Sequence SLLETDLLNNETYLIASPDGYISSIVENWNITSDNTGSWRANNNNAFVDKAGSSSLYTHKDGEFSQFILK
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Known secondary structure (DSSP) TTTTT



B
B

SS



SSTT
S

SS

TT

STT
SSS

TT




 .........570.........580.........590.........600.........610.........620.........630
Sequence PKTNYVIQYVIKGRPAIYLKNNKDTLFEDTKNNFSDFQTVTKKFNVNPSEIYFLFKNQSEYEAWGNNFII
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Known secondary structure (DSSP) TT

S
SS

S






S
STT

 .........640.........650.........660.........670.........680.........690.........700
Sequence LEIKSLEFLPQMLKPEDWIPSGNVQMKDGGRLEILGDGYFKQFIKLENDSTYHLRLSVKGTGRVSIIDES
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Known secondary structure (DSSP)




S

GGG
B

SS

TTT

SS




TT


SS
 .........710.........720.........730.........740.........750
Sequence KYLLFVNVKDEDLTRVIKNTSSKGECFIALEGTYVENSSTIFSNVSIVKE
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Known secondary structure (DSSP)

S



SS



TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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