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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6v1qB_

Fold library idPDB HeaderMoleculeTitle
c6v1qB_3.11PDB header: membrane proteinChain: B: PDB Molecule: two pore channel 3;


Added to library: Sat Dec 7 08:43:52 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MTEKFDLATVYVSDAKYNRNIFFDTSPQAVKLYLLYNHWFMQTLVYVFIIINLALALFEDPAVVPLPIWA
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Known secondary structure (DSSP)
TTS
SS







SSTTTTS
GGGTSSS
SS


 .........80.........90.........100.........110.........120.........130.........140
Sequence TSTIETICLSAFTVRIIHYAKVIPKDKFWKDPKNICIIIIVTLSFIDMVIYGALKATGHYGIRWSRVLRP
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Known secondary structure (DSSP) S
TTTTTT
TS
TTT

TT


TTGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLLVNVTEGRQLRRAFRSIRNALPQISYVFFLFMFSVLVFSLMALKLFGKRGLLTINGSPYFTDYMDIVF
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Known secondary structure (DSSP) SGGGSSSTTS

BSSSSBSS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DLYVLVTTANSPDVMMPAYNSSVYFTIFFILYIVINTYTFMSFFLAVVYNNYKKYLKEEVRQLVKAKRIK
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Known secondary structure (DSSP) TTSSTTTSSSTTTSS
GGGTTTTTTTTTTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence MCRAFSLPSRFIRQMVHHRVFVYAYDLIILVNAVFIGLDEENPVVSNAEWGFLALYMLEILLFWNWFDTI
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Known secondary structure (DSSP)

SSSSTTTTTTTT
S

TT



 .........360.........370.........380.........390.........400.........410.........420
Sequence IVVSALFGTIINSALKHSGGYTSRQVLDIVFILRVLRLIRVVDSIKRFRAIINTLIKIGPTILTFGQLIL
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Known secondary structure (DSSP) TTSSS

TTGGGGGGGGT
SSSSTTTT
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence VVYYIFAMVGMELFKGKIQFFEPNSTSPDREYCGNPLLKSTSFAKLNYCKNNFNDVISSFILLLELTVVN
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Known secondary structure (DSSP) SSSSS



SSS
GGGTTTTSSGGGTT
SSTTTTTTTTSSSSS
T
 .........500.........510.........520.........530........
Sequence QWHVLTSGFTAVTHVSARLFFVIFHIVVVIIIINIFVAFILEAFLVEY
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Known secondary structure (DSSP) TTTTS
GGGTTTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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