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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6uv3A_

Fold library idPDB HeaderMoleculeTitle
c6uv3A_1.60PDB header: rna binding protein/rnaChain: A: PDB Molecule: probable atp-dependent rna helicase ddx17;


Added to library: Sat Jan 4 10:48:58 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LPKFEKNFYVEHPEVARLTPYEVDELRRKKEITVRGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTP
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T

T
TT







SGGGS


TT

S

 .........80.........90.........100.........110.........120.........130.........140
Sequence IQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADD
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Known secondary structure (DSSP) TT


TTS
TS



TT


S
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence YGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFE
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Known secondary structure (DSSP) GGGT


TTS


S
TTS


TT

TTTSTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence PQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKL
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Known secondary structure (DSSP) TTS
TTSS


GGGGGG
SSS
SSS


TT

GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence IQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATD
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Known secondary structure (DSSP) TSSS


SSTT


TTS
TSS

G
 .........360.........370.........380.........390.........400.........410.........420
Sequence VASRGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINP
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Known secondary structure (DSSP) GGSSS


TT

SS

SSTTSS
TT


GGGGGGTT



 ......
Sequence KLMQLV
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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