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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6uplG_

Fold library idPDB HeaderMoleculeTitle
c6uplG_7.40PDB header: transcription/dnaChain: G: PDB Molecule: fact complex subunit spt16;


Added to library: Sat Dec 14 08:41:40 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SYKNPSLMPKEPHIREMKIYIDKKYETVIMPVFGIATPFHIATIKNISMSVEGDYTYLRINFYCPGSALG
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Known secondary structure (DSSP)



TTS

SS
GGGTT

TTTTSSS
GGG
SSSSSSTTTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RGNIFPNPEATFVKEITYRASNILNLQNAFRIIKEVQKRYKXXXXXXVKQDSLVINLNRSNPKLKDLYIR
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Known secondary structure (DSSP)

TTS


SS







S













TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence PNIAQKRMQGSLEAHVNGFRFTSVRGDKVDILYNNIKHALFQPCDGEMIIVLHFHLKNAIMFGKKRHTDV
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Known secondary structure (DSSP) S
SSSS


SSSS

TTT



SS
S



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QFYTEVGEITTDDDLYAEQMEREMRHKLKTAFKNFIEKVEALTKEELEFEVPFRDLGFNGAPYRSTCLLQ
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TTTSTT
S



GGG
B

BSSSS


B
 .........290.........300.........310.........320.........330.........340.........350
Sequence PTSSALVNATEWPPFVVTLDEVELIHFERVQFHLKNFDMVIVYKDYSKKVTMINAIPVASLDPIKEWLNS
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Known secondary structure (DSSP)
SS

TTSSS




STT



TT
SSB
S
TTS


B
B
B
STTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence CDLKYTEGVQSLNWTKIMKTIVDDPEGFFEQGGWSFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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Known secondary structure (DSSP) TT










TT
TTGGGGGS



SS







S

TTS



S

S



 ..
Sequence XX
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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