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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6upkH_

Fold library idPDB HeaderMoleculeTitle
c6upkH_4.90PDB header: transcription/dnaChain: H: PDB Molecule: fact complex subunit ssrp1;


Added to library: Sat Dec 14 08:35:10 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MAETLEFNDVYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRHGLKLLTKNGHVYKY
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Known secondary structure (DSSP)




SS

SSSS

B

SSS
TTT



TTT



TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLSFDIGDQPVFEIPLSNVSQCTTGKN
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Known secondary structure (DSSP) S

TTTTT








S








SSSSSS


TTS


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EVTLEFHQNDDAEVSLMEVRFYVPPTQXXXXXXXXXXXXXDAICIFRELQCLTPRGRYDIRIYPTFLHLH
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Known secondary structure (DSSP)



SS
SS










TT

STGGG
S




S


TTTT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GKTFDYKIPYTTVLRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEK
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Known secondary structure (DSSP)
SS

SSS
TTSSSSS
TT
B




SS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RFEGRLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPP
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Known secondary structure (DSSP) SSS

SS

SBTS

B






GGG
S


SSS
SS
SSS
 .........360.........370.........380.........390.........400.........410.
Sequence VHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKN
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Known secondary structure (DSSP) STT



SSTTTBTTS

TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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