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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6udeB_

Fold library idPDB HeaderMoleculeTitle
c6udeB_1.95PDB header: transferaseChain: B: PDB Molecule: glycerol kinase;


Added to library: Sat Oct 19 08:46:23 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NEKLILALDQGTTSSRAILFNKSGEIKFVSQKSFEQIFPTPGWVEHDPNEIWSSQISVAAEVIAKAGISG
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Known secondary structure (DSSP)



SS
TTS



B
SSTT


TT

G
 .........80.........90.........100.........110.........120.........130.........140
Sequence LEVAAIGITNQRETTVVWDRHTSEPIYNAIVWQDRRTSKYCDELKSQGHTDEIKQKTGLVLDAYFSATKL
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Known secondary structure (DSSP) GG
SS
BTTT

BSS

TT

TTTT
S

SSTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KWILDNVEGAREKAEAGDLCFGTVDTWLIWKLTRGKMFITDVSNASRTMMFNIRTMDWDDDLLKLFNIPR
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Known secondary structure (DSSP) STTTT

TTTS

TTSSSTTTT
TT

G
 .........220.........230.........240.........250.........260.........270.........280
Sequence AILPEVKQSSEVYGETSTTSTKIPIAGIAGDQQAALFGQMCTKPGMVKNTYGTGCFLLMNTGNEAVYSKN
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Known secondary structure (DSSP) GGS

S







TT

STT
SSS
TT




SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence NLLTTVAWKINGEVSYALEGSVFVGGAAIQWLRDGLKIIHDSSEVSTLAETVEDNGGVYFVPALTGLGAP
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Known secondary structure (DSSP) S
TTS
STS
S
SSTTTTSSS
TT


TT
B
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence YWDQYARGTIIGVTRGTTDGHIARATLEGIAFQVYDIVKAMEADAETQSTELRVDGGASASNLLMQIQSD
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Known secondary structure (DSSP) T
BTT





TT

T


SSGGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence LFGFKIIRPKTLETTALGAAYLAGLAVGFWESIDEIQSQWIIEKEFTPKEDKTKIDNMVSFWHKAVKRSQ
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Known secondary structure (DSSP) TSS
S
TSSS
TT




S
S
 .....
Sequence AWIED
Predicted secondary structure

SS confidence




Known secondary structure (DSSP) S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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