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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6u9gA_

Fold library idPDB HeaderMoleculeTitle
c6u9gA_3.98PDB header: transport proteinChain: A: PDB Molecule: pdpa;


Added to library: Sat Oct 26 08:25:19 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YKRYCIISRFKNNIDEFISQSLKIAIKELQNSCSSSLIHDYIRKIDVLLTSIDSAIQLNKLRSSLSRYIG
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Known secondary structure (DSSP)

GGG




SS

TTTT


SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YNNVLQKQEITINIKPINKNFELEDIHNSLTLKNPHIEKLEVCENIYGINGWLTFDLAYINNHKDFNFLL
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Known secondary structure (DSSP)

SS

B
TTS
B




S



SS

SS



S

GGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SPNQPILLDIQINDSFHHKRTTRFIAIGFNSNSIDIHENGVKKFKIQFHDPLKALWTKHKPSYIALNKSL
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Known secondary structure (DSSP)
SS







TT











TT




S

 .........220.........230.........240.........250.........260.........270.........280
Sequence DDIFKDNFFFDSLFSLDTNKSNNLKIRIPQAFISTVNRNFYDFFIQQLEQNKCYLKYFCDKKSGKVSYHV
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Known secondary structure (DSSP) TTS



SS

SS
SSTTS

S


SSS
TTT







SSS



 .........290.........300.........310.........320.........330.........340.........350
Sequence VDQVDNDLQRNIVNSDEDLKDKLSPYDISCFKKQILISNKSNFYVKEKNICPDVTLNTQRKEDRKISDTL
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Known secondary structure (DSSP)
SS

TTT

S
S



TT
TTTTTS







S


SS

S
S


S

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence VKPFSSILKDNLQSVEYIQSNNDDKQEIITTGFEILLTSRNTLPFLDTEITLSKLDNDQNYLLGATDIKS
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Known secondary structure (DSSP)




SS

















SSS
TTS

S

S

B





SSS
TT


 .........430.........440.........450.........460.........470.........480.........490
Sequence LYISQRKLLFKRSKYCSKQLYENHDNSITYKIKDYSNLTPEYPKYKSFSNFYINGRITIGENVNNDSKKA
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GGG
















SS

SSSTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence YKFFKNHKPEESSIAEFQENGEKGTSAILNSKADILYAIEIAKEMLSDKSSDKPIIYLPLKVNINSANNQ
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Known secondary structure (DSSP)


BSSSSS
B

SSS


SS
SSSS

SS

SS


TTSS
SS






SSSS

SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence FIPLRNDDIILIEIQSFTKGEIIELISNSAISTKKAQQQLLQRQLLGSKENCEMAYTQTSDSETFSLTQV
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Known secondary structure (DSSP)




SS
TT


S



S
SSS







SGGG


SS


 .........640.........650..
Sequence NEDCENSFLINDKKGIFLRYKS
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Known secondary structure (DSSP)
SS

SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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