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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6u8yx_

Fold library idPDB HeaderMoleculeTitle
c6u8yx_4.00PDB header: membrane proteinChain: X: PDB Molecule: nadh dehydrogenase subunit m;


Added to library: Sat Sep 12 09:18:02 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NELPIILLSPLIGGALAWLIRVKGIREAIGVVSSAIPLYFLIKLYPALEGEPIRYSLNVGGFELTLALSH
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Known secondary structure (DSSP)

SSTTT
TTSTTTTTTTTTSGGGSSS




TT




T
 .........80.........90.........100.........110.........120.........130.........140
Sequence ISWIFAMIAAVVGLSAVLGLVSTAKDSNEWLFALMSLAGALGVFLANDFVVFFLSWEIMTFASFMMVFKY
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Known secondary structure (DSSP) TSSSSSS

SSSSTTBSSSTTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NRHASLKYFVLSIAGAYAMLLAIGIIYAKTGSLSFPEISAIFRQDAMTETLLIYALFLVAFGVKAGMFPL
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Known secondary structure (DSSP)
TTS


TTTT



STTTTS

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence HVWAPDAYSETNQSYTAMFSGVLSKTGVYGFFLLYLLMYGKLAITLGNVRSAPTFGYIIAFLGGLTIMVG
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Known secondary structure (DSSP)
TTSSSS
TTT
SSSS

SSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence GILAALQEDIRKLFAYSSISQIGYILIGLGIGTPLGIAAATYHAISHALFKGLFFLIVATIIYRTGKTEF
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Known secondary structure (DSSP) TTS

STTTTTTTS
SSSSS


ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence KDYGGLAEKMPITFAMAFVAILSLAGIPPMAGFASKWLIFEAVISRNLPILGAMVFFGSAIGFVYLIRFT
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Known secondary structure (DSSP) TT



SSS
TSS

TTSSS

T
 .........430.........440.........450.........460.........470.........480.........490
Sequence YAVWFGQRPSDLEDVKDAPLPLAIGMGILAILNVIFGVAPGLVARELNKLFSNPPIGGTIWELDLGFGRY
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Known secondary structure (DSSP) TTTTSS


TTSSS




S
TTTTSSS
S



SS



SS


 .........500.........510.........520.........530.........540.........550.........560
Sequence NGLLLSIWLVIGLIIAAILYFMGAGVRKVPVTDTYQSGNPVTMEYNLTIRRNFFLPLKEAMAFWLKMSFD
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Known secondary structure (DSSP)
STT


S





SSS

TTT



TT


S

S
S
STTGGGS
S
 .........570.........580.........590.........600...
Sequence RLYHDIWKAIEELADLARSYVYNGNIQAYAWYLAIILLILVAM
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Known secondary structure (DSSP) TS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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