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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6u84A_

Fold library idPDB HeaderMoleculeTitle
c6u84A_3.70PDB header: transport proteinChain: A: PDB Molecule: transient receptor potential cation channel subfamily v


Added to library: Sat Oct 19 08:52:23 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QEPPPMESPFQREDRNRFDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLN
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Known secondary structure (DSSP)




S

SSS







T
SGGGTT


TTSTTTS
TTT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LQDGVNACIMPLLQIDKDSGNPKLLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGR
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Known secondary structure (DSSP)
BTTB
TTT
SS
GGG



SSSSTT

TT
TTT

S





T
 .........150.........160.........170.........180.........190.........200.........210
Sequence FFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALV
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Known secondary structure (DSSP) TTS

SSS


S
SSTT
S
SS



TT


SSS



SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGPYQPLSRKFTEWCYGP
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Known secondary structure (DSSP)
SSS
TTT


TTS




S



STT
TT
STT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VRVSLYDLSSVDSWEKNSVLEIIAFHCKSPNRHRMVVLEPLNKLLQEKWDRLVSRFFFNFACYLVYMFIF
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Known secondary structure (DSSP)
TT
STTSSS
TT


TTGGGTTTSTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence TVVAYHQPSLFGESMLLLGHILILLGGIYLLLGQLWYFWRRRLFIWISFMDSYFEILFLLQALLTVLSQV
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Known secondary structure (DSSP) S





SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LRFMETEWYLPLLVLSLVLGWLNLLYYTRGFQHTGIYSVMIQKVILRDLLRFLLVYLVFLFGFAVALVSL
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Known secondary structure (DSSP) TT
TTGGGGGGGSS
T
 .........500.........510.........520.........530.........540.........550.........560
Sequence SREARSEPAPYRSILDASLELFKFTIGMGELAFQEQLRFRGVVLLLLLAYVLLTYVLLLNMLIALMSETV
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Known secondary structure (DSSP) TS





SS
ST






SSSTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence NHVADNSWSIWKLQKAISVLEMENGYWWCRRKKHREGRLLKVGTRGDGTPDERWCFRVEEVNWAAWEKTL
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Known secondary structure (DSSP) S




TT

SSS






S
TTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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