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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6u75B_

Fold library idPDB HeaderMoleculeTitle
c6u75B_2.63PDB header: ligaseChain: B: PDB Molecule: e3 sumo-protein ligase siz2;


Added to library: Sat Oct 31 08:51:42 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LFTSPFYKPIVQIPDANKKLKQSAGRGCTKMKFKVSKSNHDLLKSNKSYKLYLFSGFSIPFIYETVGHEA
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Known secondary structure (DSSP)


SSS
TT



BSS



T
TT

TTS


TTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IDFPYPCELVFNGTKLEDNVKGLKKQNGTGNPANLTPYLKVPTEMNHLDLHYLNIDKEYSISCFIVEVFS
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Known secondary structure (DSSP)



SS
TT

S
TT
STTSTT




GGG


TTS
S
BSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence PEALLGKILKRPKIIKQATTAYIKRTLNETTSTVLSLQCPISCTRMKYPAKTDQCKHIQCFDALWFLHSQ
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Known secondary structure (DSSP) S

B




B
TTTSSB
SS
TT


S

 .........220.........230.........240.........250.........260.
Sequence SQVPTWQCPICQHPIKFDQLKISEFVDNIIQNCNEDVEQVEISVDGSWKPI
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SS confidence


















































Known secondary structure (DSSP) S


B
TTT

B

GGG
BTTS
TT

TTS


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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