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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6u5vA_

Fold library idPDB HeaderMoleculeTitle
c6u5vA_2.80PDB header: transferaseChain: A: PDB Molecule: fatty acid synthase subunit alpha;


Added to library: Sat Oct 19 09:37:57 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKPEIEQELSHTLLTELLAYQFASPVRWIETQDVFLKQHNTERIIEIGPSPTLAGMANRTIKAKYESYDA
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Known secondary structure (DSSP)

TTTTS


TTTS

S
SSS
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALSLQRQVLCYSKDAKEIYYKPDIPDEPVKANLLIHVLVAQKLKKPLDAVPMTKAIKDLVNGKSTVQNEI
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Known secondary structure (DSSP) TT


SSS

TTTTT









TS
GGGS
TTS

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LGDLGKEFGSTPEKPEDTPLEELAEQFQDSFSGQLGKTSTSLIGRLMSSKMPGGFSITTARKYLESRFGL
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Known secondary structure (DSSP) T



S
TTT

TTSSS

S

TS
TT

TTSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence GAGRQDSVLLMALTNEPANRLGSEADAKTFFDGIAQKYASSAGISLAALDALTAENKKLAKQQLEVLARY
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Known secondary structure (DSSP)
TTST

SS



T




 .........290.........300.........310.........320.........330.........340.........350
Sequence LQVDLNKGAKSFIKEKEASAVLQKELDLWEAEHGEFYAKGIQPTFSALKSRTYDSYWNWARQDVLSMYFD
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Known secondary structure (DSSP) TT

SST
T




GGG


 .........360.........370.........380.........390.........400.........410.........420
Sequence IIFGKLTSVDRETINQCIQIMNRANPTLIKFMQYHIDHCPEYKGETYKLAKRLGQQLIDNCKQVLTEDPV
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Known secondary structure (DSSP) TTSS
SS
STT

T

GGG
STTS

 .........430.........440.........450.........460.........470.........480.........490
Sequence YKDVSRITGPKTKVSAKGNIEYEETQKDSVRKFEQYVYEMAQGGASKEIEDKTSIIQPVSSTIPSQTIPF
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Known secondary structure (DSSP)





B


TTS


B
SS

ST



TTT





SS
GGGTS
TT


S
 .........500.........510.........520.........530.........540.........550.........560
Sequence LHIQKKTKDGWEYNKKLSSLYLDGLESAAINGLTFKDKYVLVTGAGAGSIGAEILQGLISGGAKVIVTTS
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Known secondary structure (DSSP) STT
T

TT



TTSTTTT
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence RFSKKVTEYYQNMYARYGAAGSTLIVVPFNQGSKQDVDALVQYIYDEPKKGGLGWDLDAIIPFAAIPENG
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Known secondary structure (DSSP) S



TT


SS
SS
TTTTS




S






S
 .........640.........650.........660.........670.........680.........690.........700
Sequence NGLDNIDSKSEFAHRIMLTNLLRLLGAVKSKKTTDTRPAQCILPLSPNHGTFGFDGLYSESKISLETLFN
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Known secondary structure (DSSP)

STT

TTTT


TT


S
SSSSS

SSGGGGGGTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence RWYSEDWGSKLTVCGAVIGWTRGTGLMSANNIIAEGIEKLGVRTFSQKEMAFNILGLLTPEIVQLCQEEP
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Known secondary structure (DSSP) SS
TTT


SSTTTTTGGGTTT


GGGSTTS
 .........780.........790.........800.........810.........820.........830.........840
Sequence VMADLNGGLQFIDNLKDFTSKLRTDLLETADIRRAVSIESAIEQKVVNGDNVDANYSKVMVEPRANMKFD
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Known secondary structure (DSSP)

SGGGSTT
TTTGGGTS












 .........850.........860.........870.........880.........890.........900.........910
Sequence FPTLKSYDEIKQIAPELEGMLDLENVVVVTGFAEVGPWGNSRTRWEMEAYGEFSLEGAIEMAWIMGFIKY
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Known secondary structure (DSSP)





S
S
TTTS
GGG
BTTBSTSS

STTTTS
 .........920.........930.........940.........950.........960.........970.........980
Sequence HNGNLKGKPYSGWVDAKTQTPIDEKDIKSKYEEEILEHSGIRLIEPELFNGYDPKKKQMIQEVVVQHDLE
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Known secondary structure (DSSP) TTSSS

B

TTTS

GGGGTT

GGG
SS


 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence PFECSKETAEQYKHEHGEKCEIFEIEESGEYTVRILKGATLYVPKALRFDRLVAGQIPTGWDARTYGIPE
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Known secondary structure (DSSP)

GGG
TTTS

TT


S

S
TT

STTTT

 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence DTISQVDPITLYVLVATVEALLSAGITDPYEFYKYVHVSEVGNCSGSGMGGVSALRGMFKDRYADKPVQN
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Known secondary structure (DSSP) S
TTT
SSGGGSTTTS
GGG



SS

TTTTTT



T
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence DILQESFINTMSAWVNMLLLSSSGPIKTPVGACATAVESVDIGIETILSGKAKVVLVGGYDDFQEEGSYE
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Known secondary structure (DSSP) TGGGTSSSTTTT


S
B




SSTTTTTTS
S


 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence FANMNATSNSIEEFKHGRTPKEMSRPTTTTRNGFMEAQGSGIQVIMTADLALKMGVPIHAVLAMTATATD
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Known secondary structure (DSSP) TT
B

STT

GGG


TTBTT


B
BB
T






 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence KIGRSVPAPGKGILTTAREHHGNLKYPSPLLNIEYRKRQLNKRLEQIKSWEETELSYLQEEAELAKEEFG
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Known secondary structure (DSSP)


S
SSS


GGGGGS



S

SS

GGG
TTTT
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence DEFSMHEFLKERTEEVYRESKRQVSDAKKQWGNSFYKSDPRIAPLRGALAAFNLTIDDIGVASFHGTSTV
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Known secondary structure (DSSP) SS

TTSTTTT
TTS
GGGT

GGG



S
T
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence ANDKNESATINNMMKHLGRSEGNPVFGVFQKYLTGHPKGAAGAWMLNGAIQILESGLVPGNRNADNVDKL
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Known secondary structure (DSSP) TTT

TT


T
B
GGG



TT
SSB
GG
 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence LEQYEYVLYPSRSIQTDGIKAVSVTSFGFGQKGAQAVVVHPDYLFAVLDRSTYEEYATKVSARNKKTYRY
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Known secondary structure (DSSP) GSS
TT


S

S


TTT
GGGTTTSS
 .........1550.........1560.........1570.........1580.........1590......
Sequence MHNAITRNTMFVAKDKAPYSDELEQPVYLDPLARVEENKKKLVFSDKTIQSSQSYV
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Known secondary structure (DSSP) T
SS



S
SS
TTSST
SS


TT

STTSS
SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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