PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6u5oL_

Fold library id	PDB Header	Molecule	Title
c6u5oL_	3.70	PDB header: viral protein	Chain: L: PDB Molecule: rna-directed rna polymerase l;

Links to external resources
Added to library: Sat Sep 28 09:14:37 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T V N V Y L P D S Y L K G V I S F S E T N A I G S C L L K R P Y L K N D N T A K V A I E N P V I E H V R L K N A V N S K M K I S D Y K V V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
S T S
S S
S S
S S
S T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P V N M Q H E I M K N V H S C E L T L L K Q F L T R S K N I S T L K L N M I C D W L Q L K S T S D D T S I L S F I D V E F I P S W V S N W F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G T T
S
T
S S
S
S S T T S S
G G G
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S N W Y N L N K L I L E F R R E E V I R T G S I L C R S L G K L V F I V S S Y G C I V K S N K S K R V S F F T Y N Q L L T W K D V M L S R F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T
S S
T T T T
S T T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence N A N F C I W V S N S L N E N Q E G L G L R S N L Q G M L T N K L Y E T V D Y M L S L C C N E G F S L V K E F E G F I M S E I L R I T E H A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T T S
S
S T T T T S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence Q F S T R F R N T L L N G L T D Q L T K L K N K N R L R V H S T V L E N N D Y P M Y E V V L K L L G D T L R C I K L L I N K N L E N A A E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S T T T T S
S S S
T T G

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence Y Y I F R I F G H P M V D E R D A M D A V K L N N E I T K I L R L E S L T E L R G A F I L R I I K G F V D N N K R W P K I K N L K V L S K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G T
T T S
T S S
B S
T T S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence W T M Y F K A K N Y P S Q L E L S E Q D F L E L A A I Q F E Q E F S V P E K T N L E M V L N D K A I S P P K R L I W S V Y P K N Y L P E T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S
T T
B
S
S S
S S S
G G G S
T T S S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence K N R Y L E E T F N A S D S L K T R R V L E Y Y L K D N K F D Q K E L K S Y V V R Q E Y L N D K E H I V S L T G K E R E L S V G R M F A M Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S
G G G G
S
S
S S
T T T
S T T
S S
B
S S S S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence P G K Q R Q I Q I L A E K L L A D N I V P F F P E T L T K Y G D L D L Q R I M Y I A R A S I V T D L S K F N Q A F R Y E T T A I C A D V A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S S
S T T T T T
B
S T T G G G

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence E L H G T Q S L F C W L H L I V P M T T M I C A Y R H A P P E T K G E Y D I D K I E E Q S G L Y R Y H M G G I E G W C Q K L W T M E A I S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S S S S T G G G S
B
S S
S
T T T S
S S
B S
S
T T S S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence L D V V S V K T R C Q M T S L L N G D N Q S I D V S K P V K L S E G L D E V K A D Y R L A V K M L K E I R D A Y R N I G H K L K E G E T Y I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T B
S S S
S T T T
T T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence S R D L Q F I S K V I Q S E G V M H P T P I K K V L R V G P W I N T I L D D I K T S A E S I G S L C Q E L E F R G E S I I V S L I L R N F W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
B T T B T T
T T S G G G
S S S
S
S S
T T S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence L Y N L Y M H E S K Q H P L A G K Q L F K Q L N K T L T S V Q R F F E I K R E N E V V D L W M N I P M Q F G G G D P V V F Y R S F Y R R T P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S S S
T T T T T T
S
T T T S S
G G G T
S
T T T T T B S
S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence D F L T E A I S H V D I L L K I S A N I K N E T K V S F F K A L L S I E K N E R A T L T T L M R D P Q A V G S E R Q A K V T S D I N R T A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S S T T
S
S
T T
T T
S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence T S I L S L S P N Q L F S D S A I H Y S R N E E E V G I I A E N I T P V Y P H G L R V L Y E S L P F H K A E K V V N M I S G T K S I T N L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T T T S
S S
S T S S S
S S
T T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence Q R T S A I N G E D I D R A V S M M L E N L G L L S R I L S V V V D S I E I P I K S N G R L I C C Q I S R T L R E T S W N N M E I V G V T S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
T T S
B
S S S S B
T T T S
S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence P S I T T C M D V I Y A T S S H L K G I I I E K F S T D R T T R G Q R G P K S P W V G S S T Q E K K L V P V Y N R Q I L S K Q Q R E Q L E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T S
S S
S S S
S
S S
S
S S
B
S
S S S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence I G K M R W V Y K G T P G L R R L L N K I C L G S L G I S Y K C V K P L L P R F M S V N F L H R L S V S S R P M E F P A S V P A Y R T T N Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T T T S S
S T T T G G G S
S
T T S
S B
B S S
T T

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence H F D T S P I N Q A L S E R F G N E D I N L V F Q N A I S C G I S I M S V V E Q L T G R S P K Q L V L I P Q L E E I D I M P P P V F Q G K F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S
S S
B S
S S S
S
T T T
B

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . .

Sequence N Y K L V D K I T S D Q H I F S P D K I D M L T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
T T S
S

Download: PDB structure FASTA sequence
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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	V	N	V	Y	L	P	D	S	Y	L	K	G	V	I	S	F	S	E	T	N	A	I	G	S	C	L	L	K	R	P	Y	L	K	N	D	N	T	A	K	V	A	I	E	N	P	V	I	E	H	V	R	L	K	N	A	V	N	S	K	M	K	I	S	D	Y	K	V	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S			S				S												T	S		S	S			S									S															S	S		S	T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	V	N	M	Q	H	E	I	M	K	N	V	H	S	C	E	L	T	L	L	K	Q	F	L	T	R	S	K	N	I	S	T	L	K	L	N	M	I	C	D	W	L	Q	L	K	S	T	S	D	D	T	S	I	L	S	F	I	D	V	E	F	I	P	S	W	V	S	N	W	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G					T	T				S																													T				S	S		S		S	S	T	T	S	S		G	G	G			S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	N	W	Y	N	L	N	K	L	I	L	E	F	R	R	E	E	V	I	R	T	G	S	I	L	C	R	S	L	G	K	L	V	F	I	V	S	S	Y	G	C	I	V	K	S	N	K	S	K	R	V	S	F	F	T	Y	N	Q	L	L	T	W	K	D	V	M	L	S	R	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S	S	S								T	T							S	S							T	T	T	T							S	T	T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	A	N	F	C	I	W	V	S	N	S	L	N	E	N	Q	E	G	L	G	L	R	S	N	L	Q	G	M	L	T	N	K	L	Y	E	T	V	D	Y	M	L	S	L	C	C	N	E	G	F	S	L	V	K	E	F	E	G	F	I	M	S	E	I	L	R	I	T	E	H	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	S	T	T	T	S		S																						S	T	T	T						T															S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Q	F	S	T	R	F	R	N	T	L	L	N	G	L	T	D	Q	L	T	K	L	K	N	K	N	R	L	R	V	H	S	T	V	L	E	N	N	D	Y	P	M	Y	E	V	V	L	K	L	L	G	D	T	L	R	C	I	K	L	L	I	N	K	N	L	E	N	A	A	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													T	T	T	S	T	T	T	T	S																							S	S	S		T	T					G
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	Y	I	F	R	I	F	G	H	P	M	V	D	E	R	D	A	M	D	A	V	K	L	N	N	E	I	T	K	I	L	R	L	E	S	L	T	E	L	R	G	A	F	I	L	R	I	I	K	G	F	V	D	N	N	K	R	W	P	K	I	K	N	L	K	V	L	S	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G					T							T	T											S																													T	S	S				B	S		T	T	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	W	T	M	Y	F	K	A	K	N	Y	P	S	Q	L	E	L	S	E	Q	D	F	L	E	L	A	A	I	Q	F	E	Q	E	F	S	V	P	E	K	T	N	L	E	M	V	L	N	D	K	A	I	S	P	P	K	R	L	I	W	S	V	Y	P	K	N	Y	L	P	E	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T					T	T	S										T	T			B				S				S	S																S	S	S		G	G	G	S		T	T	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	N	R	Y	L	E	E	T	F	N	A	S	D	S	L	K	T	R	R	V	L	E	Y	Y	L	K	D	N	K	F	D	Q	K	E	L	K	S	Y	V	V	R	Q	E	Y	L	N	D	K	E	H	I	V	S	L	T	G	K	E	R	E	L	S	V	G	R	M	F	A	M	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	S		G	G	G	G		S								S		S	S			T	T									T		S	T	T		S	S			B								S	S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	G	K	Q	R	Q	I	Q	I	L	A	E	K	L	L	A	D	N	I	V	P	F	F	P	E	T	L	T	K	Y	G	D	L	D	L	Q	R	I	M	Y	I	A	R	A	S	I	V	T	D	L	S	K	F	N	Q	A	F	R	Y	E	T	T	A	I	C	A	D	V	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	S	S	S						S	T	T	T	T					T												B		S	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	L	H	G	T	Q	S	L	F	C	W	L	H	L	I	V	P	M	T	T	M	I	C	A	Y	R	H	A	P	P	E	T	K	G	E	Y	D	I	D	K	I	E	E	Q	S	G	L	Y	R	Y	H	M	G	G	I	E	G	W	C	Q	K	L	W	T	M	E	A	I	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S	S	S	S	S	S					T	G	G	G	S		B					S	S							S				T	T	T	S				S	S		B	S				S			T	T	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	D	V	V	S	V	K	T	R	C	Q	M	T	S	L	L	N	G	D	N	Q	S	I	D	V	S	K	P	V	K	L	S	E	G	L	D	E	V	K	A	D	Y	R	L	A	V	K	M	L	K	E	I	R	D	A	Y	R	N	I	G	H	K	L	K	E	G	E	T	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S										T	T	B													S	S	S		S																					T	T	T					T	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	S	R	D	L	Q	F	I	S	K	V	I	Q	S	E	G	V	M	H	P	T	P	I	K	K	V	L	R	V	G	P	W	I	N	T	I	L	D	D	I	K	T	S	A	E	S	I	G	S	L	C	Q	E	L	E	F	R	G	E	S	I	I	V	S	L	I	L	R	N	F	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S				B	T	T	B				T	T							T	T	S	G	G	G		S	S	S		S		S	S															T					T	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	L	Y	N	L	Y	M	H	E	S	K	Q	H	P	L	A	G	K	Q	L	F	K	Q	L	N	K	T	L	T	S	V	Q	R	F	F	E	I	K	R	E	N	E	V	V	D	L	W	M	N	I	P	M	Q	F	G	G	G	D	P	V	V	F	Y	R	S	F	Y	R	R	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	S	S	S		T	T	T	T	T																		T		S		T	T	T							S	S		G	G	G	T					S		T	T	T	T	T	B	S			S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	D	F	L	T	E	A	I	S	H	V	D	I	L	L	K	I	S	A	N	I	K	N	E	T	K	V	S	F	F	K	A	L	L	S	I	E	K	N	E	R	A	T	L	T	T	L	M	R	D	P	Q	A	V	G	S	E	R	Q	A	K	V	T	S	D	I	N	R	T	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	S		S	S	S	T	T													S				S							T	T				T	T		S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	T	S	I	L	S	L	S	P	N	Q	L	F	S	D	S	A	I	H	Y	S	R	N	E	E	E	V	G	I	I	A	E	N	I	T	P	V	Y	P	H	G	L	R	V	L	Y	E	S	L	P	F	H	K	A	E	K	V	V	N	M	I	S	G	T	K	S	I	T	N	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S		S										T												T	T	S		S	S													S	T													S	S	S		S	S		T	T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	Q	R	T	S	A	I	N	G	E	D	I	D	R	A	V	S	M	M	L	E	N	L	G	L	L	S	R	I	L	S	V	V	V	D	S	I	E	I	P	I	K	S	N	G	R	L	I	C	C	Q	I	S	R	T	L	R	E	T	S	W	N	N	M	E	I	V	G	V	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T																				T						T	S										B		S	S	S	S	B		T												T	T	S					S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	P	S	I	T	T	C	M	D	V	I	Y	A	T	S	S	H	L	K	G	I	I	I	E	K	F	S	T	D	R	T	T	R	G	Q	R	G	P	K	S	P	W	V	G	S	S	T	Q	E	K	K	L	V	P	V	Y	N	R	Q	I	L	S	K	Q	Q	R	E	Q	L	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T	S						S	S		S	S	S							S				S	S			S				S	S						B											S			S	S	S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	I	G	K	M	R	W	V	Y	K	G	T	P	G	L	R	R	L	L	N	K	I	C	L	G	S	L	G	I	S	Y	K	C	V	K	P	L	L	P	R	F	M	S	V	N	F	L	H	R	L	S	V	S	S	R	P	M	E	F	P	A	S	V	P	A	Y	R	T	T	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S		S		T	T													T	S	S		S	T	T	T	G	G	G	S						S									T	T	S		S	B			B	S	S						T	T
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	H	F	D	T	S	P	I	N	Q	A	L	S	E	R	F	G	N	E	D	I	N	L	V	F	Q	N	A	I	S	C	G	I	S	I	M	S	V	V	E	Q	L	T	G	R	S	P	K	Q	L	V	L	I	P	Q	L	E	E	I	D	I	M	P	P	P	V	F	Q	G	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G								S		S	S		B	S																					S	S	S			S								T	T	T			B
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.
Sequence	N	Y	K	L	V	D	K	I	T	S	D	Q	H	I	F	S	P	D	K	I	D	M	L	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T									S		T	T	S						S