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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tvvB_

Fold library idPDB HeaderMoleculeTitle
c6tvvB_2.80PDB header: dna binding proteinChain: B: PDB Molecule: mjarecj;


Added to library: Sat Jan 30 08:37:34 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MMEKLKEIEKVTKAIKEKILNHYGYIRVITHHDTDGLSSGGILAKMLMRTNKLFHLTVVEHLSKEVIEKL
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Known secondary structure (DSSP)

T

S

SSTT



S


 .........80.........90.........100.........110.........120.........130.........140
Sequence AKENEVNKPLFIFADMGSGQIEEIIKHNFNAIILDHHPPVIKDSFINENIIQLNPHIFGVDGSREITASG
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Known secondary structure (DSSP) TSSSS


S
SSTTTT


S

SS

SB
SSS
GGGGT

TTTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence VCYLVAREFGYYDLSVLAIVGIIGDMQYNPLLGLNKFIVNEAREYRYVKIMNDIVYNIYDVEIYKAIAYC
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Known secondary structure (DSSP) GGGT
GGGTT

TT

TTSGGGGS
S

 .........220.........230.........240.........250.........260.........270.........280
Sequence TKPYIPDLASEGKAFKFLKDIGIDPNKKQLDDTDKKKLLSAIIFKYPKIENLLIDRYLIEHKVRDAFLLS
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Known secondary structure (DSSP)
TT

GGG
STT

TT
SS

TTT
S
GGGGSSSS
B
 .........290.........300.........310.........320.........330.........340.........350
Sequence EMLNAVGRNGLFAVGIGICLEDDECIKIGNQILWEYKKNLINELKSVKLKKLNNIYYFEGKKGMIGIIAS
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Known secondary structure (DSSP) TT
TT
T



SS


TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ILVDDKPVIGYHIEGDIAKFSARGNRDLVNRGLNLSVAMAVAKEFGGNGGGHDVASGAVVSKDKVQEFLK
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Known secondary structure (DSSP) S
SSS



SS


TT

TGGGTTTTSB



SS


B
GGG
 ........
Sequence RVDEIIGE
Predicted secondary structure

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Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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