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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6ts2B_

Fold library idPDB HeaderMoleculeTitle
c6ts2B_5.74PDB header: protein bindingChain: B: PDB Molecule: udp-glucose-glycoprotein glucosyltransferase-like protein,


Added to library: Sat Jan 11 08:20:06 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SPSINVALKAAFPSPPYLVELLETAASDNTTIYYSLLDRIAKGHFAEATTDKALYEKFLEVLRDDGHMDP
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Known secondary structure (DSSP)

SS



SSSS
TTTTT

STSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence EALSAFKLALSLRTATPRVEAHYQYYTATVEPSLSGTQEGCDQWFLIDGEQYCSPTLDTSHGKVKGEDQL
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Known secondary structure (DSSP) TSSSTTB
S

SSTTSTT
STTS

B
SS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence RTLPFDRKFGVGSRDVILYADITSKSFAPFHEVAMDLAKKGKASYRVRYRRSPSHSRESLSVNGYGVELV
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Known secondary structure (DSSP) S

TT


BS

S
TTSTTTS


TTS











 .........220.........230.........240.........250.........260.........270.........280
Sequence LKRTDYIVIADIKPLEKSELAALGMKAASFVMQSEKPFEALLKLTQDFPKYSNSLGSQNVSAEFEAEHRG
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Known secondary structure (DSSP)
S







SS



SSTTTTS
TTSTTTTSTT
S
SSTT
TTTTGGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NREVFLPEGSNVLWLNGLHLIDRQIQPFGLVDLLTRERKLIKSVLDLGLTGQQAVDLLGHAEVAHAKSRN
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Known secondary structure (DSSP) TTTTSS
SS

TT
SSS
STTT

S
TT


 .........360.........370.........380.........390.........400.........410.........420
Sequence TLIFPEDKNELTVLNVNKIYIENHDLMSKVPVIEASKESTRDDWAALTVVADLDDIEGQELVYYALRFRK
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Known secondary structure (DSSP)




S








TTTS



TTS
GGG

TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence SNDGVRLDIVHNPKDTSRSPSVLAQRLKSREDKLLDFTRFLDLETALETGEFEPDVAYDASLANFLASSN
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Known secondary structure (DSSP)
TT

S
SSS
TSTTTT

SSTSS




T
 .........500.........510.........520.........530.........540.........550.........560
Sequence MKAGDNFVILNGRVLGPITSADDFKKEDFEVFLQAERRTRILPVYKALEDLGLDDKVSGPLSAAKLTSVT
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Known secondary structure (DSSP)

TT

TT


SSTTSS
TTT
TTS

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence ALSTISDLPQGIFDNAPTVRTTLFKQWNSTYTSFEVGDASTATIFFVAVINPASEIGQRWVAVLKVLSEL
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Known secondary structure (DSSP) TTT





SSS

S





GGGGS

SSSS
SSS
S

SSSTTTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence EGVHLRVFLNPTVMIEELPVKRFYRYVLSSSPSFDESGKVKALSARFTGVPRETLLVVGMDVPPAWLVTS
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Known secondary structure (DSSP) TT



S


S
S

S



SS

B
TTSSB



S

SSS
B






TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence KVAVDDLDNLRIKDIKAKRGTEHVEAIYELEHILIEGHSREIPGAHAPRGVQLVLETENNPHFADTIIMA
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Known secondary structure (DSSP) SS
SSSB
S





B

SS



TT


SS
S
S


T
 .........780.........790.........800.........810.........820.........830.........840
Sequence NLGYFQFKANPGVYNIRLKEGRSSEIFTLESVGAKGWGPIPGDDNTEVVLMDFQGTTLYPRLRRKPGMEE
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Known secondary structure (DSSP) TT







S

TT

SS
SS

TT






STT


B


TT


 .........850.........860.........870.........880.........890.........900.........910
Sequence EDVLEPSTHAEINIFSVASGHLYERMLNIMMASVMHHTNHTVKFWFIEQFLSPSFKDFIPHMAAEYGFKY
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Known secondary structure (DSSP)
SSS
S



SB



STTT

S
B


TTS
TTTTTT
B

 .........920.........930.........940.........950.........960.........970.........980
Sequence EMVTYKWPHWLRQQKEKQREIWGYKILFLDVLFPLSLDKVIFVDADQIVRTDMYDLVEHPLDGAPYGFAP
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Known secondary structure (DSSP)




SSS


SSTTSS
SSTTS
TT



S


S
STTTTTS


S
SB
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence MCDSRVEMEGYRFWKTGYWANYLKGKPYHISALYVVDLQRFRELAAGDRLRQQYHALSADPNSLANLDQD
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Known secondary structure (DSSP)

TT
STTGGG
GGGSGGGTTTSSS


TTTSSTTSS
STTTS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence LPNHMQFTIPIATLPQEWLWCETWCSDETLKDARTIDLCNNPKLDRARRQVPEWTKYDEEIAELARRVRE
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Known secondary structure (DSSP) TTTTS
B



TTS
TTTS
GGGGTT
S







TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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