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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6trsB_

Fold library idPDB HeaderMoleculeTitle
c6trsB_2.68PDB header: transcriptionChain: B: PDB Molecule: rna polymerase ii transcription factor b subunit 2;


Added to library: Sat Oct 24 08:37:54 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SDYDIPTTENLYFQGAAAHNSFGVPSSLPVDPRIDIAFLDNYARKKWEDILHYVVSSVPVHGGPKASVKD
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Known secondary structure (DSSP)



S

TS




B

S


TT

TS




S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLLAGRLVERTGIGITQAGFTFLLQEANAQVWTLLLLWLEAADQAKKPDSIEMLSFLFMLASLELGRAYD
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Known secondary structure (DSSP) TTS




S




TS
TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence TDALSETRRNMLPALVDFGLIYIPREDTRQYFPTRLATTLTSSASSAHKGSIIIETNYRLYAYTSSPLQI
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Known secondary structure (DSSP) STTS
TTTS

SS
TT
TSS





STT

TTS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence AVLALFTHLNMRFAGMVTGRLTRESIRRAISFGITADQIISYLASHAHEQMVRAAAAAGRPVLPPTVVDQ
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Known secondary structure (DSSP) TTTS
STT

TTT

TB
TSS
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence IRLWQLENERMRTSPGFLFKDFENVEEYMALAGYAEEIGVLVWRSDRKRMFFASKFEQLRDYLKSRKKEG
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Known secondary structure (DSSP) SS








S
T
TTTTS
STTT



S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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