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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6trfA_

Fold library idPDB HeaderMoleculeTitle
c6trfA_4.11PDB header: protein bindingChain: A: PDB Molecule: udp-glucose-glycoprotein glucosyltransferase-like protein;


Added to library: Sat Jan 11 08:22:03 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SPSINVALKAAFPSPPYLVELLETAASDNTTIYYSLLDRIAKGHFAEATTDKALYEKFLEVLRDDGHMDP
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Known secondary structure (DSSP)





SSS
TTGGGG

STTS

 .........80.........90.........100.........110.........120.........130.........140
Sequence EALSAFKLALSLRTATPRVEAHYQYYTATVEPSLSGTQEGCDQWFLIDGEQYCSPTLDTSHGKVKGEDQL
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Known secondary structure (DSSP) TTTTTGGG

S

SS
SSTTSSTT





B

SS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RTLPFDRKFGVGSRDVILYADITSKSFAPFHEVAMDLAKKGKASYRVRYRRSPSHSRESLSVNGYGVELV
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Known secondary structure (DSSP) S

TT


BS

S

SSTTSTS


TTS




S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LKRTDYIVEEIADIKPLEKSELAALGMKAASFVMQSEKPFEALLKLTQDFPKYSNSLGSQNVSAEFEAEH
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Known secondary structure (DSSP) S









SS



SS

TTSSSGGGGSTT
S
SS




TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RGNREVFLPEGSNVLWLNGLHLIDRQIQPFGLVDLLTRERKLIKSVLDLGLTGQQAVDLLGHAEVAHAKS
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Known secondary structure (DSSP) SS
TT

TT
GGG

GGGS

T
 .........360.........370.........380.........390.........400.........410.........420
Sequence GDDEPRRFDWRDDIEEGQVIIWLNNLEKDKRYKSFSPSIWVLIHHFGHGLPQIPTGQAIDQAKVVYYLLE
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Known secondary structure (DSSP) S


B


SGGGTT
S





SSSSSSSTTS


S

SS






 .........430.........440.........450.........460.........470.........480.........490
Sequence NYGLAAATAYLEKSYEEQSTGQPNERIFNEVIKDKSLRPDGVELSFKDIFISEKHEKQIHLSKHWVERLR
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Known secondary structure (DSSP) T
T
SSS







SS



S



TTTTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence AGGDVPTVFFDGFPIPREDNWLRVMNHRLMQDLQALQQAGYFGMLNESMWLPGFFLEKALSRRNTLIFPE
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Known secondary structure (DSSP)

SSS
TTSSSSTT
S
SS

GGGGTTTS
BSS

TTTS
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence DKNELTVLNVNKIYIENHDLMSKVPVIEASKESTRDDWAALTVVADLDDIEGQELVYYALRFRKSNDGVR
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Known secondary structure (DSSP) STT


B

TTSS



SSS
TTT


TTS
TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence LDIVHNPKDTSRSPSVLAQRLKSREDKLLDFTRFLDLETALETGEFEPDVAYDASLANFLASSNMKAGDN
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Known secondary structure (DSSP)




SSSSS
TSGGGTT

SS






TT

TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence FVILNGRVLGPITSADDFKKEDFEVFLQAERRTRILPVYKALEDLGLDDKVSGPLSAAKLTSVTALSTIT
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Known secondary structure (DSSP) TTS
TTSS
TT
TTS

STT

 .........780.........790.........800.........810.........820.........830.........840
Sequence TLFKQWNSTYTSFEVGDASTATIFFVAVINPASEIGQRWVAVLKVLSELEGVHLRVFLNPTVMIEELPVK
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Known secondary structure (DSSP)
TTSSS

TTTS
TTT
S
TT
STSTT


S

SS
S

 .........850.........860.........870.........880.........890.........900.........910
Sequence RFYRYVLSSSPSFDESGKVKALSARFTGVPRETLLVVGMDVPPAWLVTSKVAVDDLDNLRIKDIKAKRGT
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Known secondary structure (DSSP)

SS

B
TTS
B






SS



TT
SS
SSSB
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence EHVEAIYELEHILIEGHSREIPGAHAPRGVQLVLETENNPHFADTIIMANLGYFQFKANPGVYNIRLKEG
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Known secondary structure (DSSP) S

SS



TT

SS
S
S

SGGG
S
TT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence RSSEIFTLESVGAKGWGPIPGDDNTEVVLMDFQGTTLYPRLRRKPGMEEEDVLEPSKTEHAEINIFSVAS
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Known secondary structure (DSSP)

SS
SS

TT




STT



TT



SSS


TTTS
S


 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence GHLYERMLNIMMASVMHHTNHTVKFWFIEQFLSPSFKDFIPHMAAEYGFKYEMVTYKWPHWLRQQKEKQR
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Known secondary structure (DSSP) ST
SS
GGGS
T





SSS


SS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence EIWGYKILFLDVLFPLSLDKVIFVDADQIVRTDMYDLVEHPLDGAPYGFAPMCDSRVEMEGYRFWKTGYW
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Known secondary structure (DSSP) TTS
TT



SS

S
TS

TT
S




SS
GGG
GGGS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence ANYLKGKPYHISALYVVDLQRFRELAAGDRLRQQYHALSADPNSLANLDQDLPNHMQFTIPIATLPQEWL
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Known secondary structure (DSSP) SSSS


TTTSTTS
SSTTTTS


GGG
 .........1270.........1280.........1290.........1300.........1310.........
Sequence WCETWCSDETLKDARTIDLCNNPMTKEPKLDRARRQVPEWTKYDEEIAELARRVREEKP
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Known secondary structure (DSSP) B
TTTS
TTGGGG
S




SS




TTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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