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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tqeA_

Fold library idPDB HeaderMoleculeTitle
c6tqeA_4.30PDB header: transport proteinChain: A: PDB Molecule: abc transporter atp-binding protein/permease;


Added to library: Sat Apr 4 10:14:24 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MGPKLFKPSIDWSRAFPDSVYWVGKAWTISAICVLAILVLLRYLTPWGRQFWRITRAYFVGPNSVRVWLM
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Known secondary structure (DSSP)



S


SS
SSSSTTTTTS
TTTS
TTTSSGGGGT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LGVLLLSVVLAVRLNVLFSYQGNDMYTALQKAFEGIASGDGTVKRSGVRGFWMSIGVFSVMAVLHVTRVM
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Known secondary structure (DSSP) T
SSSSTTTTTTTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ADIYLTQRFIIAWRVWLTHHLTQDWLDGRAYYRDLFIDETIDNPDQRIQQDVDIFTAGAGGTPNAPSNGT
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Known secondary structure (DSSP) TTTTTSSSSSTTTGGGGSSS



TTTTT
SSSS


TT

G
 .........220.........230.........240.........250.........260.........270.........280
Sequence ASTLLFGAVQSIISVISFTAILWNLSGTLNIFGVSIPRAMFWTVLVYVFVATVISFIIGRPLIWLSFRNE
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Known secondary structure (DSSP) GG
TTTTSTTTTTT





SSS

SSTTSSSSTTTTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence KLNAAFRYALVRLRDAAEAVGFYRGERVEGTQLQRRFTPVIDNYRRYVRRSIAFNGWNLSVSQTIVPLPW
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Known secondary structure (DSSP) TTSSSTTT
TTTSSTTTTTTTTTTTTTTTSSSSTTTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence VIQAPRLFAGQIDFGDVGQTATSFGNIHDSLSFFRNNYDAFASFRAAIIRLHGLVDANEKGRALPAVLTR
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Known secondary structure (DSSP) SSTTTS
STTSTTTTTSSTTS
S


 .........430.........440.........450.........460.........470.........480.........490
Sequence PSDDESVELNDIEVRTPAGDRLIDPLDVRLDRGGSLVITGRSGAGKTTLLRSLAELWPYASGTLHRPGGE
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Known secondary structure (DSSP)
SSS
S

TTS





SS


SSSSSSTTT

SS

SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence NETMFLSQLPYVPLGTLRDVVCYPNSAAAIPDATLRDTLTKVALAPLCDRLDEERDWAKVLSPGEQQRVA
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Known secondary structure (DSSP) S





SS



SS
TTTTSS
SS
SSSS
GGGTTTTT
GGGSS
TT

S

TTTS
TTTTTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence FARILLTKPKAVFLDGSTSALDTGLEFALYQLLRSELPDCIVISVSHRPALERLHENQLELLGGGQWRLA
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Known secondary structure (DSSP) TT

SS
S

SS

TTTSS




STTSGGG
S
SSS
 ....
Sequence PVEA
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Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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