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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tmhA_

Fold library idPDB HeaderMoleculeTitle
c6tmhA_3.10PDB header: membrane proteinChain: A: PDB Molecule: atp synthase subunit alpha,subunit alpha;


Added to library: Mon Jan 4 13:32:02 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KISPSEMSRLLEERIAGWKTQTSTEEVGRVVSVGDGIARLFGLEGVQAGELVEFQNGMTGMALNLETDNV
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Known secondary structure (DSSP)


GGGSTTTTTT


TTS
TTTT
TT

TTTTS

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GVVIFGDDRSVLEGDSVKRTGRIVDVPIGPGLLGRVVDALGNPIDGKGPIPAKERRRVELKAPGIIPRKS
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Known secondary structure (DSSP) SS
TTS

TT

SGGGTT

TTS
B
SSS




SSS




SSSB

 .........150.........160.........170.........180.........190.........200.........210
Sequence VHEPMMTGLKCVDALVPVGRGQRELIIGDRQTGKTAVAVDAIINQKEINDSTDDESKKLYCIYVAVGQKR
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Known secondary structure (DSSP)


B


S
S

BTT
B


SSSSTTT
S
SSS

S

 .........220.........230.........240.........250.........260.........270.........280
Sequence STVAQIVKALEQRDAMKYTTVVAATASEAAPLQFLAPYSGCAMGEWFRDSGRHCVIIYDDLSKQATAYRQ
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Known secondary structure (DSSP) TT
GGG
SSS
T

 .........290.........300.........310.........320.........330.........340.........350
Sequence MSLLLRRPPGREAYPGDVFYLHSRLLERAAKMGDKSGGGSLTALPVIETQAGDVSAYIPTNVISITDGQI
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Known secondary structure (DSSP) TTTT



GGG

TTTT

BB
TTTTS

SSS
TTSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence FLETELFYKGIRPAINVGLSVSRVGSAAQVKAMKQVAGTMKLELAQYREVAAFAQFGSDLDASTRQLLTR
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Known secondary structure (DSSP) B
STTTTTT
SS
B
TTT
SSGGGGS
SSGGGGTGGGS
TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence GTALTELLKQRQYSPMKNSVQVCVLYCGVKGYLDPLDPKEISRFESLFIDYINANHQDILKTIETEKELS
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Known secondary structure (DSSP) S


TT



TTSSTTS
GGG




 .........500.........510..
Sequence EKTEAKLRAAVDEFVAMNEFKK
Predicted secondary structure


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Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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