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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6titA_

Fold library idPDB HeaderMoleculeTitle
c6titA_2.07PDB header: viral proteinChain: A: PDB Molecule: glycoprotein;


Added to library: Sat Sep 5 08:55:59 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KFTIVFPHNQKGNWKNVPSNYHYCPSSSDLNWHNDLIGTALQVKMPKSHKAIQADGWMCHASKWVTTCDF
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Known secondary structure (DSSP)
S
SS




TT








TTTTTT


GGGG

B


 .........80.........90.........100.........110.........120.........130.........140
Sequence RWYGPKYITHSIRSFTPSVEQCKESIEQTKQGTWLNPGFPPQSCGYATVTDAEAVIVQVTPHHVLVDEYT
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Known secondary structure (DSSP) STT







T





S





SSS




B
TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GEWVDSQFINGKCSNYICPTVHNSTTWHSDYKVKGLCDSNLISMDITFFSEDGELSSLGKEGTGFRSNYF
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Known secondary structure (DSSP)


TTBGGG
SSBSSTT






STTS

TTS
GGGTTSSS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence AYETGGKACKMQYCKHWGVRLPSGVWFEMADKDLFAAARFPECPEGSSISAPSQTSVDVSLIQDVERILD
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Known secondary structure (DSSP)


TT
TT
TTS
S
T

B

TT





BTTSS
GGGS
 .........290.........300.........310.........320.........330.........340.........350
Sequence YSLCQETWSKIRAGLPISPVDLSYLAPKNPGTGPAFTIINGTLKYFETRYIRVDIAAPILSRMVGMISGT
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Known secondary structure (DSSP) TT



TTS

SSTTSSSSS
TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TTERELWDDWAPYEDVEIGPNGVLRTSSGYKFPLYMIGHGMLDSDLHLSSKAQVFEHPHIQDAASQLPDD
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Known secondary structure (DSSP)






TT
GGG
TT

SSSS

GGGG




B

SSTTTS
TT
 .........430..
Sequence ESLFFGDTGLSK
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Known secondary structure (DSSP)

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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