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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6th1R_

Fold library idPDB HeaderMoleculeTitle
c6th1R_3.40PDB header: viral proteinChain: R: PDB Molecule: immediate early protein 1;


Added to library: Sat Nov 28 08:38:26 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PGDRCPRHVARIIAENDPPIRCDLTLQELLSEVQVDFEPSASEVVAMEGLMDEQHFIPHDPHSKKAAVQS
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Known secondary structure (DSSP)








SS


S

S
S



GGGS




SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LVIAIKTADLLLQMIHENVKRDIRTTCIQMANESYARADIVRDSLIAASQGKYTALGKIVFHSYTNFMPV
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Known secondary structure (DSSP) S


SGGGS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence NANESEKRAWMEMLGECTSHGNKLCEMANAQVEQETRDIINIMFKNIDDVVTQTTRAMRGVFDPPDTVKA
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Known secondary structure (DSSP) S

TTTT





 .........220.........230.........240.........250.........260.........270.........280
Sequence LSAAAQLIRVWEHDNVINDQSVSTSSVVTAALEANENLAKALRDVSGYAEVQFNRLCLSILTSAKERIDI
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Known secondary structure (DSSP) TT
TTTS


T
 .........290.........300.........310.........320.........330.........340.........350
Sequence IYHSARSQHLACNVRMNVAQQNLATFILTNARERPNDAVIRTRRAVANTGILLFTGQHITRDALDKAAES
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Known secondary structure (DSSP)
TTTTT



TS
 .........360
Sequence KSVEEIVGMS
Predicted secondary structure


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Known secondary structure (DSSP)

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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