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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tgzF_

Fold library idPDB HeaderMoleculeTitle
c6tgzF_3.20PDB header: viral proteinChain: F: PDB Molecule: 55 kda immediate-early protein 1;


Added to library: Sat Nov 28 08:34:12 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PETPVTKATTFLQTMLRKEVNSQLSLGDPLFPELAEESLKTFEQVTEDCNENPEKDVLAELVKQIKVRVD
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Known secondary structure (DSSP)


TTSSS
S
GGGTT




STTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence MVRHRIKEHMLKKYTQTEEKFTGAFNMMGGCLQNALDILDKVHEPFEEMKCIGLTMQSMYENYIVPEDKR
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Known secondary structure (DSSP) TGGGGGGTT



GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence EMWMACIKELHDVSKGAANKLGGALQAKARAKKDELRRKMMYMCYRNIEFFTKNSAFPKTTNGCSQAMAA
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Known secondary structure (DSSP)



SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LQNLPQCSPDEIMAYAQKIFKILDEERDKVLTHIDHIFMDILTTCVETMCNEYKVTSDACMMTMYGGISL
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Known secondary structure (DSSP) GGGS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence LSEFCRVLCCYVLEETSVMLAKRPLITKPEVISVMKRRIEEICMKVFAQYILVCSPSVDDLRAIAEESDE
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Known secondary structure (DSSP)
TT





S

 ..
Sequence EE
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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