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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tfjC_

Fold library idPDB HeaderMoleculeTitle
c6tfjC_2.90PDB header: toxinChain: C: PDB Molecule: vegetative insecticidal protein;


Added to library: Sat Aug 15 08:21:58 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSFIDYFNGIYGFATGIKDIMNMIFKTDTGGDLTLDEILKNQQLLNDISGKLDGVNGSLNDLIAQGNLNT
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Known secondary structure (DSSP)



S




S
SS





 .........80.........90.........100.........110.........120.........130.........140
Sequence ELSKEILKIANEQNQVLNDVNNKLDAINTMLRVYLPKLTSMLSDVMKQNYALSLQIEYLSKQLQEISDKL
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Known secondary structure (DSSP) GG
 .........150.........160.........170.........180.........190.........200.........210
Sequence DIINVNVLINSTLTEITPAYQRIKYVNEKFEELTFATEDILDELTELTELAKSVTKNDVDGFEFYLNTFH
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Known secondary structure (DSSP) GSS




GGGTSS


TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DVMVGNNLFGRSALKTASELITKENVKTSGSEVGNVYNFLIVLTALQAKAFLTLTTCRKLLGLADIDYTS
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Known secondary structure (DSSP) T

SS


S
SS


SS
TT




T
 .........290.........300.........310.........320.........330.........340.........350
Sequence IMNEHLNKEKEEFRVNILPTLSNTFSNPNYAKVKGSDEDAKMIVEAKPGHALIGFEISNDSITVLKVYEA
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Known secondary structure (DSSP) TGGGS



S



S



SS
SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence KLKQNYQVDKDSLSEVIYGDMDKLLCPDQSEQIYYTNNIVFPNEYVITKIDFTKKMKTLRYEVTANFYDS
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Known secondary structure (DSSP)
B
STT
B
STT


S
SSS







TT
SS
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence STGEIDLNKKKVESSEAEYRTLSANDDGVYMPLGVISETFLTPINGFGLQADENSRLITLTCKSYLRELL
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Known secondary structure (DSSP) SSS


SS



SS
S
SS


TTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LATDLSNKETKLIVPPSGFISNIVENGSIEEDNLEPWKANNKNAYVDHTGGVNGTKALYVHKDGGISQFI
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Known secondary structure (DSSP) TTTT








SS
TT

STTTT

SSS
SSSSSS


TT
SSSSS

SS


 .........570.........580.........590.........600.........610.........620.........630
Sequence GDKLKPKTEYVIQYTVKGKPSIHLKDENTGYIHYEDTNNNLEDYQTINKRFTTGTDLKGVYLILKSQNGD
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Known secondary structure (DSSP) SSS

SS

SSSS








S

TTSTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence EAWGDNFIILEISPSEKLLSPELINTNNWTSTGSTNISGNTLTLYQGGRGILKQNLQLDSFSTYRVYFSV
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Known secondary structure (DSSP)











B

TT

SSTTTTS




SS
 .........710.........720.........730.........740.........750.........760....
Sequence SGDANVRIRNSREVLFEKRYMSGAKDVSEMFTTKFEKDNFYIELSQGNNLYGGPIVHFYDVSIK
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Known secondary structure (DSSP) SS
SS
S

S


S

SS


SS

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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