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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tf5A_

Fold library idPDB HeaderMoleculeTitle
c6tf5A_2.00PDB header: hydrolaseChain: A: PDB Molecule: oligopeptidase b;


Added to library: Sat Nov 28 09:20:06 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMTPPKAEKRPYPITTHGDTRVDDYYWLRDDERTDPQVLDYLQAENAFTDAALKPQQALRETLYEEMVAR
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TTTTGGG

TTS

GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence ENLYFQSVPYVRHGYRYQTRFEPGNEYAIYVRQPQAESEHWDTLIDGNQRAEQREFYTLGGLEVSPDNQK
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Known secondary structure (DSSP) S
S



TT
TT
SS
TT

S

TT
S


TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LAVAEDFLSRRQYDIRFKNLSDDSWTDEVLENTSGSFEWANDSATVYYVRKHAKTLLPYQVYRHVVGTDP
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Known secondary structure (DSSP) SSSSS
GGGT
S


TTSS
TTT

TTS
G
 .........220.........230.........240.........250.........260.........270.........280
Sequence QLDELIYEEQDDTFYVGLEKTTSDRFILIHLSSTTTSEILLLDADRADSTPQMFVPRRKDHEYGIDHYHQ
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Known secondary structure (DSSP) GG

S
TTS
TTSS
SS
SSSTT


SS


TT

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence HFYIRSNKDGKNFGLYQSEQADEAQWQTLIAPRIEVMLEGFSLFRDWLVVEERSEGLTQLRQIHWQSGEV
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Known secondary structure (DSSP)
TT
TT
SSS
GGG


BTTB
SSTTTTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence KRIAFDDPTYTTWLAYNPEPETELLRYGYSSMTTPTTLYELNLDSDERVMLKQQEVKNFTPENYRSERVW
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Known secondary structure (DSSP)




SS





S
SSSS

TTT




TT

GGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence VKARDGVEVPVSLVYRHDSFARGTNPLMVYGYGSYGSSMDPAFSASRLSLLDRGFVFVLAHIRGGGELGQ
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Known secondary structure (DSSP)
TTS
GGG

TT
S




TT







STTTTT


TTSSTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LWYEDGKLFKKQNTFNDFIDVTEALIAQGYGDAKRVFAMGGSAGGLLMGAVINQAPELFNGIVAQVPFVD
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Known secondary structure (DSSP) TTSGGGTTTSS
TTST
TTS
SS



 .........570.........580.........590.........600.........610.........620.........630
Sequence VVTTMLDESIPLTTGEYDEWGNPNQQAYYDYILQYSPYDQVKAQDYPHMLVTTGLHDSQVQYWEPAKWVA
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Known secondary structure (DSSP) T
TTSTTTGGGTTTT

TTSTT


SS


SSS
SS
T
 .........640.........650.........660.........670.......
Sequence KLRELKTDDRQLLLYTDMDSGHGGKSGRFKAYEDIALEYAFILALAE
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Known secondary structure (DSSP)

S




S

SSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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