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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tedV_

Fold library idPDB HeaderMoleculeTitle
c6tedV_3.10PDB header: transcriptionChain: V: PDB Molecule: rna polymerase ii-associated factor 1 homolog;


Added to library: Sat Jul 25 08:26:42 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ERSGVVCRVKYCNSLPDIPFDPKFITYPFDQNRFVQYKATSLEKQHKHDLLTEPDLGVTIDLINPDTYRI
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Known secondary structure (DSSP)

S





























S

S
TSS





SSTTTTS


SSS

S
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DPNVLLDPADEKLLEEEIQRSQQHAKVVPWMRKTEYISTEFNKDRDSQITAIEKTFEDAQKSISQHYSKP
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Known secondary structure (DSSP) SSS



GGGSSS




GGG


TT







S




STTS




SSST
 .........150.........160.........170.........180.........190.........200.........210
Sequence RVTPVEVMPVSQAMIRGMMDEEGNQFVAYFLPVEETLKKRKRDQEEEMDYAPDDVYDYKIAREYNWNVKN
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Known secondary structure (DSSP) T














TTT


SSTTTT

SS
SS
S



SSSS
SSS



SSS




B

 .........220.........230.........240....
Sequence KASKGYEENYFFIFREGDGVYYNELETRVRLSKR
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Known secondary structure (DSSP) B

TTTT





STT




S



B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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