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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tc0C_

Fold library idPDB HeaderMoleculeTitle
c6tc0C_3.60PDB header: cytosolic proteinChain: C: PDB Molecule: mms19 nucleotide excision repair protein homolog;


Added to library: Sat Aug 1 08:51:18 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PMGALCGLVQDFVMGQQEGPADQVAADVKSGTVLQVVEALGSSLENAEPRTRARGAQLLSQVLLQCHSLL
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Known secondary structure (DSSP)
TT



TSSSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence SEKEVVHLILFYENRLKDHHLVVPSVLQGLRALSMSVALPPGLAVSVLKAIFQEVHVQSLLQVDRHTVFS
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Known secondary structure (DSSP)

SS
S
S


S
TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IITNFMRSREEELKGLGADFTFGFIQVMDGEKDPRNLLLAFRIVHDLISKDYSLGPFVEELFEVTSCYFP
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Known secondary structure (DSSP)
T
TSS


TT



TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence IDFTPPPNDPYGIQREDLILSLRAVLASTPRFAEFLLPLLIEKVDSEILSAKLDSLQTLNACCAVYGQKE
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Known secondary structure (DSSP)




SS
TTTS

TS
GGGSS
TTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence LKDFLPSLWASIRREVFQTASERVEAEGLAALHSLTACLSCSVLRADAEDLLGSFLSNILQDCRHHLCEP
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Known secondary structure (DSSP) TT



SS


SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence DMKLVWPSAKLLQAAAGASARACEHLTSNVLPLLLEQFHKHSQSNQRRTILEMILGFLKLQQKWSYEDRD
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Known secondary structure (DSSP)
TT


SS

SSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence ERPLSSFKDQLCSLVFMALTDPSTQLQLVGIRTLTVLGAQPGLLSAEDLELAVGHLYRLTFLEEDSQSCR
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Known secondary structure (DSSP) SS

SS




SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence VAALEASGTLATLYPGAFSRHLLPKLAEELHKGESTKCSRHFRCLQALSAVSTHPSIVKETLPLLLQHLC
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Known secondary structure (DSSP)
T

TTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence QANKGNMVTESSEVVAVCQSLQQVAEKCQQDPESYWYFHKTAVPCLFALAVQASMPLLEDEVLAALASVI
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Known secondary structure (DSSP) TTTT
SS
TSST




TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence GTATTHLSPELAAQSVTCIVPLFLDGNTSFLPENSFPFQPFQDGSSGQRRLVALLTAFVCSLPRNVEIPQ
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Known secondary structure (DSSP) SS




SSS
GGG



SSSS

TTTS
S



S
 .........710.........720.........730.........740.........750.........760.........770
Sequence LNRLMRELLKQSCGHSCPFSSTAATKCFAGLLNKQPPGQQLEEFLQLAVGTVEAGLASESSRDQAFTLLL
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Known secondary structure (DSSP) S

SSS
SSSSTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence WVTKALVLRYHPLSACLTTRLMGLLSDPELGCAAADGFSLLMSDCTDVLTRAGHADVRIMFRQRFFTDNV
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Known secondary structure (DSSP) TT
TTGGG
TTTTS

SSS

TTTT



TT
 .........850.........860.........870.........880.........890.........900.........910
Sequence PALVQGFHAAPQDVKPNYLKGLSHVLNRLPKPVLLPELPTLLSLLLEALSCPDSVVQLSTLSCLQPLLLE
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Known secondary structure (DSSP) TS
STTSTT

STTTTTSS
 .........920.........930.........940.........950.........960.........970.........980
Sequence APQIMSLHVDTLVTKFLNLSSSYSMAVRIAALQCMHALTRLPTSVLLPYKSQVIRALAKPLDDKKRLVRK
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Known secondary structure (DSSP)
GGGTTSS
GGGS
TGGGG
SS
 .........990....
Sequence EAVSARGEWFLLGS
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Known secondary structure (DSSP) TS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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