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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6tb4H_

Fold library idPDB HeaderMoleculeTitle
c6tb4H_3.80PDB header: transcriptionChain: H: PDB Molecule: subunit (60 kda) of tfiid and saga complexes;


Added to library: Sat Feb 1 08:25:56 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SHTLWSPSDTVKDAAESLGIFNLNEEAAKNLAMDIEYRIHEILDQASKFMRHGKRRTLHTSDIDRALKVL
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Known secondary structure (DSSP)

SSS
TTTT




TTTT
SS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence NLEPLYGYDVSRPLVFKEALVGYVDDDEVDFEKLINEPLPKVPRFSTFTAHWLAIEGVQPAIPQNPSPND
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Known secondary structure (DSSP) T







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SSS


SSSS


S
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence IKNILPINRGSMEISNQKQGLEVKPLVKHVLSRELQLYFDKIVEVLLNQEETKEAELLRNSALQSVRADP
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Known secondary structure (DSSP) TSS
TTSS






TT
S
STT


STTSS
S



SSSS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence GLHQLVPYFIQFISETITKNLKNISLLSTMLELIYSLLMNESLFLEPYVHAIIPCILTLLLAKKIGNVDD
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Known secondary structure (DSSP)
GGGS
SS

SS


STT


S



S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ELQKQQQLALRELSASLLERVIEDFGSSYSTLKPRITRTLLRAFVSVNNTTPGTQYGALLGLRGLGSEVI
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Known secondary structure (DSSP) S
SSTTSSSS
SS
STT
STT
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence RIVVLGNVINWSSTFLEKLQQEDQVFLIDTLIETLRVLIDNERLKQRVGDLIADRIQACDDAQDIYWGIF
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Known secondary structure (DSSP)


SSTT


S

TTTT

TTT
 .
Sequence F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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