PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c6t9iH_

Fold library id	PDB Header	Molecule	Title
c6t9iH_	3.90	PDB header: gene regulation	Chain: H: PDB Molecule: transcriptional coactivator hfi1/ada1;

Links to external resources
Added to library: Sat Feb 1 08:26:11 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y K K I V M S L P L N D R N R L K M I T K E A G K R G F I F C S V F Q A R L N N I P K I P I V T N P E S L K R V K S N N L K T P L E W S Q D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T
S
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I M N G F N V P L A S E S H S L P D T D S F Y L R M V G I A R E H G L V G T V D A R C V E L I S L A L D Q Y L K N I I E F T I D T V R Y R R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S
T
S
S S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K K Y S D Y S G L Y K S V S E M A A D K R D A K I K Q L D D D K N E D E C A D E A K S I N N G N N S S K D D I G D I S M S S A V N E E L H E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
T T T G G G S
S T S
T T
S S
S S T T S S T T T
S

. . . . . . . . . 220 . . . . . . .

Sequence N R T I S L T N E D I Y D S L S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	K	K	I	V	M	S	L	P	L	N	D	R	N	R	L	K	M	I	T	K	E	A	G	K	R	G	F	I	F	C	S	V	F	Q	A	R	L	N	N	I	P	K	I	P	I	V	T	N	P	E	S	L	K	R	V	K	S	N	N	L	K	T	P	L	E	W	S	Q	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S									T	T			S																		S																		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	M	N	G	F	N	V	P	L	A	S	E	S	H	S	L	P	D	T	D	S	F	Y	L	R	M	V	G	I	A	R	E	H	G	L	V	G	T	V	D	A	R	C	V	E	L	I	S	L	A	L	D	Q	Y	L	K	N	I	I	E	F	T	I	D	T	V	R	Y	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S							S	S																			T			S				S	S																												S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	K	Y	S	D	Y	S	G	L	Y	K	S	V	S	E	M	A	A	D	K	R	D	A	K	I	K	Q	L	D	D	D	K	N	E	D	E	C	A	D	E	A	K	S	I	N	N	G	N	N	S	S	K	D	D	I	G	D	I	S	M	S	S	A	V	N	E	E	L	H	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S											T	T									T	G	G	G	S			S									T	S				T	T				S	S		S	S	T	T	S	S	T	T	T									S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Sequence	N	R	T	I	S	L	T	N	E	D	I	Y	D	S	L	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S