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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6t9iE_

Fold library idPDB HeaderMoleculeTitle
c6t9iE_3.90PDB header: gene regulationChain: E: PDB Molecule: transcription initiation factor tfiid subunit 6;


Added to library: Sat Feb 1 08:26:31 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YTIWSPQDTVKDVAESLGLENINDDVLKALAMDVEYRILEIIEQAVKFKRHSKRDVLTTDDVSKALRVLN
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Known secondary structure (DSSP)

SS
SSTTTT




TT
SS

STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VEPLYGYYDGSEVNKAVSFSKVNTSGGQSVYYLDEEEVDFDRLINEPLPQVPRLPTFTTHWLAVEGVQPA
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Known secondary structure (DSSP)








SS

TT







SSS








SS















S
SSSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence IIQNPNLNDIRVSQPPFIRGAIVTALNDNSASVTDTGASQHLSNVKPGQNTEVKPLVKHVLSKELQIYFN
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Known secondary structure (DSSP)
TTS

SSTTTTTS
TTTS






B



STTTTTTSSSSTTTTT




B


SS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KVISTLAAQHMKQAALTSLRTDSGLHQLVPYFIQFIAEQITQNLSDLQLLTTILEMIYSLLSNTSIFLDP
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Known secondary structure (DSSP) TT






TTTS
TT
TT
TTS

SG
 .........290.........300.........310.........320.........330.........340.........350
Sequence YIHSLMPSILTLLLAKKLGGSPKDDSPQEIHEFLERTNALRDFAASLLDYVLKKFPQAYKSLKPRVTRTL
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Known secondary structure (DSSP) GGTTTS
S
SS




S


TTTTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LKTFLDINRVFGTYYGCLKGVSVLEGESIRFFLGNLNNWARLVFNESGITLDNIEEHLTKFTKEETQILV
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Known secondary structure (DSSP) S
SSS
TS
TTTSGGGS

SS

SSSGGG



S
 .........430...
Sequence DTVISALLVLKKD
Predicted secondary structure

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Known secondary structure (DSSP) TGGGSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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